Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq296 118 3e-21 seq442 98.7 2e-15 >seq296 Length=113092 Score = 118 bits (130), Expect = 3e-21 Identities = 130/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||||||||| ||||| || ||||| || || |||||| | ||| |||||| | Sbjct 113059 ACAGGAAAAACCATCACATTAGAAGTTGAGCCATCAGACACAATTGAAAATGTAAAGGCA 113000 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| |||||||||||| || ||| || | | |||||||| ||||| Sbjct 112999 AAGATCCAAGACAAAGAAGGAATTCCACCAGACCAACAGCGTTTGATCTTCGCAGGAAAA 112940 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTAC 206366 || ||||||||||| | || ||| ||| ||||| |||||||||| ||||| Sbjct 112939 CAATTGGAAGATGGTCGTACATTGAGCGACTACAATATCCAGAAAGAATCTAC 112887 >seq442 Length=86436 Score = 98.7 bits (108), Expect = 2e-15 Identities = 156/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | || || || || || || | ||||| || |||||| Sbjct 25213 CAGATCTTCGTCAAAACCTTGACGGGTAAGACAATTACCCTCGAAGTCGAGCCATCTGAC 25154 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| ||||||||||| || ||||||||| || || |||| Sbjct 25153 ACGATTGAAAATGTCAAGGCTAAGATTCAAGATAAGGAAGGAATTCCACCAGA---TCAA 25097 Query 206293 -AGACTT--ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 || || ||||| || ||||| || || |||||||| | || ||| ||| |||||| Sbjct 25096 CAGCGTTTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACATTGAGCGACTACAAC 25037 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||| |||||||| || |||||| | || ||| | ||||| Sbjct 25036 ATCCAAAAAGAGTCAACACTTCACTTAGTGTTGCGCCTTCG 24996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181426727394025