Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq296 118 3e-21
seq442 98.7 2e-15
>seq296
Length=113092
Score = 118 bits (130), Expect = 3e-21
Identities = 130/173 (75%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
||||||||||| ||||| || ||||| || || |||||| | ||| |||||| |
Sbjct 113059 ACAGGAAAAACCATCACATTAGAAGTTGAGCCATCAGACACAATTGAAAATGTAAAGGCA 113000
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| |||||||||||| || ||| || | | |||||||| |||||
Sbjct 112999 AAGATCCAAGACAAAGAAGGAATTCCACCAGACCAACAGCGTTTGATCTTCGCAGGAAAA 112940
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTAC 206366
|| ||||||||||| | || ||| ||| ||||| |||||||||| |||||
Sbjct 112939 CAATTGGAAGATGGTCGTACATTGAGCGACTACAATATCCAGAAAGAATCTAC 112887
>seq442
Length=86436
Score = 98.7 bits (108), Expect = 2e-15
Identities = 156/221 (71%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| | || || || || || || | ||||| || ||||||
Sbjct 25213 CAGATCTTCGTCAAAACCTTGACGGGTAAGACAATTACCCTCGAAGTCGAGCCATCTGAC 25154
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | ||| || ||| ||||||||||| || ||||||||| || || ||||
Sbjct 25153 ACGATTGAAAATGTCAAGGCTAAGATTCAAGATAAGGAAGGAATTCCACCAGA---TCAA 25097
Query 206293 -AGACTT--ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349
|| || ||||| || ||||| || || |||||||| | || ||| ||| ||||||
Sbjct 25096 CAGCGTTTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACATTGAGCGACTACAAC 25037
Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
|||| |||||||| || |||||| | || ||| | |||||
Sbjct 25036 ATCCAAAAAGAGTCAACACTTCACTTAGTGTTGCGCCTTCG 24996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181426727394025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |