Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq442 132 5e-26 seq296 102 8e-17 >seq442 Length=86436 Score = 132 bits (146), Expect = 5e-26 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | |||||| || || || | ||||||||||||| |||||||||||||||| || Sbjct 24995 ACGAAGGCGCAACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGT 25054 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| |||||| | ||||| || | | |||| | ||||||||||||||| || || || Sbjct 25055 ACGACCATCTTCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCC 25114 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| ||||| ||| || || | | ||| | || || | ||||| ||||||| Sbjct 25115 TTCCTTATCTTGAATCTTAGCCTTGACATTTTCAATCGTGTCAGATGGCTCGACTTCGAG 25174 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | || ||||| |||| ||||| | ||| ||||||||| Sbjct 25175 GGTAATTGTCTTACCCGTCAAGGTTTTGACGAAGATCTGCATG 25217 >seq296 Length=113092 Score = 102 bits (112), Expect = 8e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | | || ||||| || || ||||||||||||| ||||| |||||| Sbjct 112874 AACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTCGCTCAATGTACGACCATCTTC 112933 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||||| || | |||| | ||||||||| ||||| || || |||||||| || Sbjct 112934 CAATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGGTGGAATTCCTTCTTTGTCTTG 112993 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || ||| || | | ||| | || || | ||||| ||||| | || | ||||| Sbjct 112994 GATCTTTGCCTTTACATTTTCAATTGTGTCTGATGGCTCAACTTCTAATGTGATGGTTTT 113053 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || |||| ||| || | |||||| |||||| Sbjct 113054 TCCTGTCAAAGTCTTGACGAAAATTTGCATG 113084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476456152419000