Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq442 127 2e-24 seq296 109 6e-19 seq17255 89.7 5e-13 >seq442 Length=86436 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||||||| | ||| || || || || ||||| ||||||||||||| | || || Sbjct 24999 AGGCGCAACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGTACGA 25058 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||||| || ||||| ||||||||||| ||||| || || || ||||| Sbjct 25059 CCATCTTCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCC 25118 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || |||||||| || ||||| || | ||||| || | || || ||||| ||| Sbjct 25119 TTATCTTGAATCTTAGCCTTGACATTTTCAATCGTGTCAGATGGCTCGACTTCGAGGGTA 25178 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || || ||||| ||||| || ||||| Sbjct 25179 ATTGTCTTACCCGTCAAGGTTTTGACGAAGATCTGCAT 25216 >seq296 Length=113092 Score = 109 bits (120), Expect = 6e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 |||||||| | || || | || | || | || ||||| || || || ||||||||| Sbjct 112854 TTTCCTCCACGAAGACGAAGAACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTCG 112913 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | | || || || || | ||||| ||||| || ||||||||||| || || || Sbjct 112914 CTCAATGTACGACCATCTTCCAATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGGT 112973 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || |||||||| ||||| || ||| || || || | |||||| || | || Sbjct 112974 GGAATTCCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTGTCTGATGGCTCA 113033 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || |||||||| || || ||||| || |||||||||||||| Sbjct 113034 ACTTCTAATGTGATGGTTTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 113083 >seq17255 Length=1118 Score = 89.7 bits (98), Expect = 5e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 134580 AAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACC 134639 || ||||||||||| || || || || || ||||| || ||||| ||||| || || Sbjct 1 AAGATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTATCTTGGATTTTAGCCTTTACA 60 Query 134640 GCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTA 134699 || | || || || | || || || | ||||| |||||||| ||||| |||||| Sbjct 61 TTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTAATAGTTTTACCAGTTAATGTTTTA 120 Query 134700 ACGAAAATTTGCATTTTGT 134718 ||||||||||||||| ||| Sbjct 121 ACGAAAATTTGCATTCTGT 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505233987583000