Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq442 127 2e-24
seq296 109 6e-19
seq17255 89.7 5e-13
>seq442
Length=86436
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||||||| | ||| || || || || ||||| ||||||||||||| | || ||
Sbjct 24999 AGGCGCAACACTAAGTGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGTACGA 25058
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || | ||||| || ||||| ||||||||||| ||||| || || || |||||
Sbjct 25059 CCATCTTCTAATTGTTTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCC 25118
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| |||||||| || ||||| || | ||||| || | || || ||||| |||
Sbjct 25119 TTATCTTGAATCTTAGCCTTGACATTTTCAATCGTGTCAGATGGCTCGACTTCGAGGGTA 25178
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || ||||| || || ||||| ||||| || |||||
Sbjct 25179 ATTGTCTTACCCGTCAAGGTTTTGACGAAGATCTGCAT 25216
>seq296
Length=113092
Score = 109 bits (120), Expect = 6e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543
|||||||| | || || | || | || | || ||||| || || || |||||||||
Sbjct 112854 TTTCCTCCACGAAGACGAAGAACCAAATGCAATGTAGATTCTTTCTGGATATTGTAGTCG 112913
Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603
| | || || || || | ||||| ||||| || ||||||||||| || || ||
Sbjct 112914 CTCAATGTACGACCATCTTCCAATTGTTTTCCTGCGAAGATCAAACGCTGTTGGTCTGGT 112973
Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663
|| || |||||||| ||||| || ||| || || || | |||||| || | ||
Sbjct 112974 GGAATTCCTTCTTTGTCTTGGATCTTTGCCTTTACATTTTCAATTGTGTCTGATGGCTCA 113033
Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || |||||||| || || ||||| || ||||||||||||||
Sbjct 113034 ACTTCTAATGTGATGGTTTTTCCTGTCAAAGTCTTGACGAAAATTTGCAT 113083
>seq17255
Length=1118
Score = 89.7 bits (98), Expect = 5e-13
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 134580 AAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACC 134639
|| ||||||||||| || || || || || ||||| || ||||| ||||| || ||
Sbjct 1 AAGATCAAACGCTGTTGGTCTGGTGGAATTCCTTCCTTATCTTGGATTTTAGCCTTTACA 60
Query 134640 GCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTA 134699
|| | || || || | || || || | ||||| |||||||| ||||| ||||||
Sbjct 61 TTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTAATAGTTTTACCAGTTAATGTTTTA 120
Query 134700 ACGAAAATTTGCATTTTGT 134718
||||||||||||||| |||
Sbjct 121 ACGAAAATTTGCATTCTGT 139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505233987583000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |