Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq343 574 7e-159
seq119 289 4e-73
seq205 105 9e-18
>seq343
Length=103200
Score = 574 bits (636), Expect = 7e-159
Identities = 1100/1600 (69%), Gaps = 41/1600 (3%)
Strand=Plus/Plus
Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433
||||||||||| | | ||||||||||| |||| || ||||| || ||||||||
Sbjct 5020 GTAAACTGAATAGCATTTGCAGCGGGTTTTGTTCGTAAGTAATACATTCCAGTTTTCAGT 5079
Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493
|| | |||||||||| ||||| || |||| ||| |||| | || || |||| |
Sbjct 5080 CCCATTTTCCATCCGTAAAAATGAATGGACGTTAATTTCCCATAATTGGGTTCAGCTACA 5139
Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553
|||||||| | ||| |||||||| || || |||||||| | ||| || | ||||| ||
Sbjct 5140 TGAATATTAAACGACTGACTTTGGTCTATAAAAGCTCCACGATCGGCAGACATTTGAAT- 5198
Query 68554 ATACTCTTTTGA--GGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611
| | | |||| | ||||||||||| || ||| | || | ||| |||||||||||||
Sbjct 5199 -TTGTGTCTTGACGGAAATTTCCCAAACCGTTTTATATATATTTTTTATATCATCTGGAA 5257
Query 68612 --GGCTC-GTATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCAT 68668
|||| || | || || || ||| || | |||||| | ||||| || || ||||
Sbjct 5258 TTTGCTCAATAGTCTGTATTGAACCATTATTTGCAATAATTTTGTTCTTCATATCGTCAT 5317
Query 68669 TCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCC 68728
||| || | || || ||| | | | ||||| ||||||| | ||||||||| |
Sbjct 5318 CCCATAAACCACGTTCAGTCAAATCCTTGATAAGATGGTGATTAACAACTTGAAATTCAC 5377
Query 68729 CA--GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT-TCATTAT 68785
|| || |||| | |||| | |||| |||||| || || |||| || || | |||||||
Sbjct 5378 CACTGAGAACA--CGACGATTATAAACATTACTTGTGTAAGGTT-CAAAGCTCTCATTAT 5434
Query 68786 TTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAA 68845
| |||| ||| |||||||||||||| || ||||| ||||| | || | ||||| |
Sbjct 5435 TACCCAAAATCTGAGCAGTTGATGCTGTCGGCATTGGTGCAATTAAGAGTGAATTTCGGA 5494
Query 68846 GACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAA 68905
||||| || | ||||| ||||||||| || ||||||||| | ||| | ||
Sbjct 5495 GACCAAACTTTTTAATTTTTTCTTTTAGAGCTTCCCAATCCCACAAATCGGTGGGAGTCT 5554
Query 68906 CATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATG--ATCCATTATATGTTTC 68963
|| ||| | ||| ||||||| | || || | || | |||||| || || ||
Sbjct 5555 TATCCCACATATCATATTGTAATACACCTTT--TGACACCGGACATCCATCGTAAGTCTC 5612
Query 68964 ATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGT 69023
||| ||||| ||||| |||| |||||| || | ||| |||||||| |||||||||||
Sbjct 5613 ATATGGTCCCAATTGTTCTGCTAATTCACAGCTGGACTCCAATGCACCATAATAAATTGT 5672
Query 69024 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTC--TAGACTATCGAATGG-ATAATGTAA 69080
||| || || | | ||| | || || ||||| |||| || |||| || | |
Sbjct 5673 TTCAAATATTTGTTGATTTAAATTTTTCGCTTCGTTAGA--TTCATATGGCATTCT-CAT 5729
Query 69081 AAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATT 69140
| |||||| |||||||||||||| ||||| ||||| || ||||| | |||||| ||
Sbjct 5730 CAAAATAAAAGCATCTGCCAATCCTTGAACTCCAATTCCAATAGGACGATGTCTAAAGTT 5789
Query 69141 TGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCG 69200
||| | || ||||||| || ||||| ||||| | | ||||||||||| | ||| |
Sbjct 5790 TGACCGTTTAGCTTCTTCAACGGGATAGTAATTTACGTTAATAATTTTATTCAAATTCCT 5849
Query 69201 GACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA---TCGTCCA---TCTAT 69254
|||| ||| || ||||| | |||| |||| ||| | || || | | | |
Sbjct 5850 TGTGACTATTTTTGTAACTTCCTTCAATTTGTGAAAGTCATATTCTCTTCGATTTTGTTT 5909
Query 69255 AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGC 69314
||||||||||| | || | ||||||| |||||||||||| || |||| | |||
Sbjct 5910 GACAAACATATTTAAAGCAATTGATGCTAAATTACAAACTGCAACTTCATCCTTACTTGA 5969
Query 69315 ATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATT 69374
|||||||| ||| || ||||||| ||| ||| || ||||| ||||| || |||||
Sbjct 5970 ATATTGTACTATTTCCGTACATAAATTCGAACAACGTATTGTCCCAAGATTCTGTTGATT 6029
Query 69375 ACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGA 69434
|| ||| || | ||||| || || ||| | || ||||||||||| | ||||
Sbjct 6030 TGATTTCCGGTTGCATGAATCCTTATACAGCATATAAGGTGTACCAGTTTCTACTTGAGC 6089
Query 69435 TTCGATAATAGATTTCCAA--ACGACCCT--AGCATTTATTACGGTCTTGTAACGCTTC- 69489
|| || |||| | || || | || || |||| | | | || ||||
Sbjct 6090 CTCAAT----GATTGCGAACCACAAATCTTGTGCCTTTACT--TGACGAATATACCTTCC 6143
Query 69490 -TCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548
||| |||||| | ||| || | ||||| || || | ||| | ||
Sbjct 6144 TTCTGCTTCATAGCCTTCATAAAGTTTCACAAATTCCTCACCGTACGATTCAAAAAGACC 6203
Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608
|||| ||| |||||||| |||||||||| |||| | | ||| || ||| ||
Sbjct 6204 GGGACTACTATTAGGACACATTAATGACCACATTTCATTGTTTTCAACCCGACGCATGAA 6263
Query 69609 TAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGT 69668
| ||| |||||||| | || ||| | ||||| | ||| |||||| ||||| ||
Sbjct 6264 CAAATCTGGAATCCACAATGCATAAAACATGTCTCTAGCTCTGACTTCTTCTTTTCCAGT 6323
Query 69669 AttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGC 69728
|||||| || | ||| ||||| || | ||||||| |||||| ||||| | |||||| ||
Sbjct 6324 ATTTTTCTTTAAATCCAGAAATTCAAAAATATCACCATGCCAAGGTTCCAAATATATTGC 6383
Query 69729 CATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGAC 69788
| | || || ||||||||||| || || || | || | || || ||||| || ||
Sbjct 6384 AAACGCGCCTGGACGTTTATTTCCACCTTGGTCAACATAACGTGCGGTATTATTGTATAC 6443
Query 69789 TCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCT 69848
||| | ||| |||| || ||||| || | |||||||| |||| ||||| ||||| |
Sbjct 6444 TCTTAACATTGGAACAAGGCCATTTGAAATCCCATTTGTACCAGCTATATATGTTCCTTT 6503
Query 69849 TGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACA 69908
||| ||||| | || | | ||| ||||| ||||| ||| |||| || ||
Sbjct 6504 TGCTCGAATGCAATGAACATTAACACCAATTCCACCTGCTGATTTGCTTATTAATGCGCA 6563
Query 69909 ACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCT 69948
|||| ||||| ||||| |||||||| || |||||||
Sbjct 6564 TTGTTTTAATGTATCATAAATACCCTCAATAGAATCATCT 6603
>seq119
Length=197918
Score = 289 bits (320), Expect = 4e-73
Identities = 578/843 (69%), Gaps = 35/843 (4%)
Strand=Plus/Plus
Query 39311 GACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTC--TCGAAAAAATTAGTTTTGC 39368
||||||||||| | ||||| |||||||||| | |||| ||||| || || || ||||
Sbjct 167143 GACATAACTCCACTCTTTTGATATTCACCAA--CCTTTCGTTCGAAGAAGTTTGTCTTGC 167200
Query 39369 CTTCCAATGATATATTTTCCATGAAATCA-AACGGATTAGTTGCATTATAtttttttttA 39427
| || | ||| ||| |||||| |||| | || ||||| | | |||||| ||| | |
Sbjct 167201 CCTCAAGTGAAATAAATTCCAT-AAATGAGAATGGATTTTTGGTATTATAGACTTTATCA 167259
Query 39428 AATCCTAATTC-TGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTC 39486
| ||| ||||| ||| ||| ||| ||||||||||||||||| |||| | ||
Sbjct 167260 AGTCCCAATTCACCCAATAAAT-GATCAGCAACAAATTCTATGTACTGAGTCATTAAATC 167318
Query 39487 ACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTC 39546
||||||||| || | | |||||||| || || || |||| ||| || || || || |
Sbjct 167319 ACAATTCATGCCCAACATCTTAACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTT 167378
Query 39547 TACGGCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAAT---AAATG 39603
||| |||||||| || || | ||||| || | ||||| | | | | |||
Sbjct 167379 TACAGCCTCTGTGATAAT---TTCAACTACTCTTTCCTTTGGTGGCTTCTGTTCAAGATG 167435
Query 39604 TTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTT 39663
||| |||||||||| || ||||||| ||| || || || ||||| ||| | ||| ||
Sbjct 167436 TTTGTACATTAAGCATGCAAAGTCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCATT 167495
Query 39664 AGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGA 39723
|||||||| | || ||||||| || | ||| || | ||||||||| || |||||
Sbjct 167496 TGAAAATGTCAACCCTGGCATTAATCCTCTCTTCTTAATCCAAAATATAGCTGCAAAGCT 167555
Query 39724 TCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGT 39783
||| |||||| || ||||| || |||||||| |||| || || || || | |||
Sbjct 167556 ACCACTAAAGAAAATCCCTTCGACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTTGC 167615
Query 39784 A-TCATTATG--TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGT 39840
| || | || |||||| || ||||| ||||| |||||||| ||||| || | |||
Sbjct 167616 ATTCTTGCTGGATATCCAATTTAAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGTGT 167675
Query 39841 TTCTATAGCATT---AAAGAGATAA---TGTTTTTCATCACTATCTTTAACATATGTATC 39894
|| || ||||| |||| | | || ||| | |||| ||| ||| || ||
Sbjct 167676 CTCAATTGCATTGAATAAGAAGTCACGCTGCTTTGC------ATCTCTAATATAAGTTTC 167729
Query 39895 TATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAA 39954
||||| | ||||| || || || | ||||| || || || || ||||| || ||
Sbjct 167730 AATTAATATTGAGTACATCTCCGAGTGTACATTTTCCATAGCAATTTGGAATCCATAGAA 167789
Query 39955 ACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCAC 40014
||| ||||| | || ||| || || || || | || ||||| ||||| ||
Sbjct 167790 GAATCGAGCTTCTGGAACTTGAACTTCCTGACTGAAACGCTCAATTAAATTCTCATTTAC 167849
Query 40015 TATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAAT---ATTTTTCATC 40071
|| |||||| || ||||| || || |||||||| ||||||| | | |||
Sbjct 167850 GATGCCATCAGATGCAGCAAAGAAAGCTAATACATGCGAGATAAAATGACGCTCTGAATC 167909
Query 40072 GGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 40131
| | || |||||||| | ||||||||||||| ||| ||||| || |||||||
Sbjct 167910 ---CTTGAGATTGTTCCAGTCTTCCATATCTTTTGATAAATCGACTTCCTCGACTGTCCA 167966
Query 40132 AAA 40134
||
Sbjct 167967 GAA 167969
>seq205
Length=143123
Score = 105 bits (116), Expect = 9e-18
Identities = 117/154 (76%), Gaps = 3/154 (2%)
Strand=Plus/Minus
Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682
||||||| |||||| || ||||||| ||| | |||||| ||||| || | |||||||
Sbjct 86381 AAGTCACGATGTAGTCCTTCATCTCGTGAAATGAGTTCGTTTGAAAAAGTCAATCCAGGC 86322
Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAG--AAAAGAAGATGC 39740
||||| || |||||||| ||| |||| || || || |||| | | | |||| || ||
Sbjct 86321 ATTAGTCCTCGCTTTTTTAGCTAAAAGATTGCTGC-AAAGCTTCTGCTAAAAAAATATAA 86263
Query 39741 CTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC 39774
|||||| || |||||||||| || ||| || ||
Sbjct 86262 TTTCTACAGCGGCAAATGCAATAATTCTTTCACC 86229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686685339981000
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