Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq767 233 2e-56
seq119 196 4e-45
seq10553 172 4e-38
seq933 95.1 1e-14
>seq767
Length=55330
Score = 233 bits (258), Expect = 2e-56
Identities = 402/573 (70%), Gaps = 12/573 (2%)
Strand=Plus/Plus
Query 40866 GGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACT 40925
|||||| | ||||| |||||||||||||||| |||||||||||| || |||||| | ||
Sbjct 37575 GGTGATTTGGGTCCAGTTTATGGATTTCAGTGGCGACATTTTGGTGCCAAATATAAAAC- 37633
Query 40926 ATGTACTCTGAT-TATACCAA--TAAAGGAATGGATCAATTACAGTGCGTTATAGATACG 40982
||| | |||| ||| || ||||||| || |||||| || || || || |||
Sbjct 37634 ATG--CGATGATGAATATGAAGGCCAAGGAATTGACCAATTAAAGGATGTCATTGA-ACG 37690
Query 40983 -ATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGT 41041
|| ||| || |||| || || ||||| |||||| |||| ||||| ||| |||| |
Sbjct 37691 CATCAAAGCCAATCCAAATGATCGTCGTATTATATTGAGCGCATGGAATCCAGTGGACAT 37750
Query 41042 ACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGA 41101
| |||||| | ||||| ||||| | | ||| ||||| || ||||||||
Sbjct 37751 TCCACAAATGGCACTTCCACCATGTCACTGTCTCGTTCAATTTTATGTCGCTAATGGTGA 37810
Query 41102 ACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACAT 41161
| || || ||||| || |||||||||| ||| ||||| || || || || || || ||
Sbjct 37811 ATTGAGCTGCCAATTATACCAAAGATCAGCTGATATGGGTCTTGGAGTTCCTTTCAATAT 37870
Query 41162 AGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGA 41221
|| ||||| | | ||||| |||||||| || ||||| ||||| || ||||||||
Sbjct 37871 TGCATCGTATGCCTTATTGACGTACATGATTGCTCATGTTACAAATTTGAAGCCTGGTGA 37930
Query 41222 ATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGA 41281
|||||||| || || || |||| |||||||||| ||||||| ||||| || | |||
Sbjct 37931 TTTTGTTCATACTTTTGGCGATGCTCATATTTACACGAATCACACTGAGCCATTGAAAGA 37990
Query 41282 ACAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAA 41341
||||| ||| || || | ||||| ||| | | || || || ||| ||
Sbjct 37991 GCAACTCGAACGTAAGCCACGTCCATTCCCACAGTTGAAAATCAAGCGTCAAGTTTCTAA 38050
Query 41342 CATTGATGATTTTTGCATCGATGATTTTGTCGT--TTGCGATTACAATCCGTACCCTAAA 41399
|| ||||||||| | || ||||||| || ||| || || ||||||| ||
Sbjct 38051 TATCGATGATTTTAAGTTTGAAGATTTTGAAGTCATTG-GA-TATGATCCGTATCCACCT 38108
Query 41400 ATCCACATGGACATGTCTGTATGATAATTGATT 41432
|| | ||||| ||| |||| | || ||| |||
Sbjct 38109 ATTAAAATGGAAATGGCTGTTTAATTATTAATT 38141
>seq119
Length=197918
Score = 196 bits (216), Expect = 4e-45
Identities = 499/749 (67%), Gaps = 24/749 (3%)
Strand=Plus/Minus
Query 43835 CATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAAT 43894
|||||||| || || || || || |||||||| || || || || ||||| |||
Sbjct 167897 CATTTTATCTCGCATGTATTAGCTTTCTTTGCTGCATCTGATGGCATCGTAAATGAGAAT 167838
Query 43895 TTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTT 43954
|| || || || || ||||||||| | |||||||| |||| || ||||| ||
Sbjct 167837 TTAATTGAGCGTTTCAGTCAGGAAGTTCAAGTTCCAGAAGCTCGATTCTTCTATGGATTC 167778
Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014
|||||||| || |||||| | || ||||| |||||| | | || || || || ||
Sbjct 167777 CAAATTGCTATGGAAAATGTACACTCGGAGATGTACTCAATATTAATTGAAACTTATATT 167718
Query 44015 AAAGATGG---GCA-CGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACC-TGCGA 44069
| ||||| ||| || || | || || || ||||| || || ||| | || || |
Sbjct 167717 AGAGATGCAAAGCAGCGTGA--CTTC--TTATTCAATGCAATTGAGACACTTCCATGTG- 167663
Query 44070 TTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCA-----AATGATTCTTTTGG 44124
|||| | || || |||||||| | || |||||| | || |||| |||||
Sbjct 167662 TTAAGAAGAAGGCTGACTGGGCTTTAAATTGGATA--TCCAGCAAGAATGCAAACTTTGG 167605
Query 44125 AGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGC 44184
|||||| || | || ||||||| ||| ||||| ||||||||| || ||||| ||
Sbjct 167604 TGAACGAGTTATTGCTTTTGCAGCTGTCGAAGGGATTTTCTTTAGTGGTAGCTTTGCAGC 167545
Query 44185 CATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAAT 44244
||||||||| | ||||| |||| || ||||| |||||||| ||||||||||| | ||
Sbjct 167544 TATATTTTGGATTAAGAAGAGAGGATTAATGCCAGGGTTGACATTTTCAAATGAACTTAT 167485
Query 44245 AAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGA 44304
| || ||||| | ||| | || ||||| ||||| | | |||| ||
Sbjct 167484 TTCGAGAGACGAAGGACTTCATCGTGACTTTGCATGCTTAATGTACAAACATCT---TGA 167428
Query 44305 CGATAAGCCTTC--ATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAA 44362
| ||||| | | | |||| | | || ||| | |||||| ||||| || ||
Sbjct 167427 ACAGAAGCCACCAAAGGAAAGAGTAGT--TGAAATTATCACAGAGGCTGTAAAAATTGAG 167370
Query 44363 CAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAACTTTTGATG 44422
| |||||| | || ||| | || || || | | || |||||| ||| |||
Sbjct 167369 AAGGAATTTTTAACTGACGCACTTCCAGTTAAGATGTTGGGCATGAATTGTGATTTAATG 167310
Query 44423 AACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACAC 44482
| || || || |||| |||| |||| |||| | ||| |||| |||||| |
Sbjct 167309 ACTCAGTACATAGAATTTGTTGCTGATCATTTATTGGGTGAATTGGGACTTGATAAAGTC 167250
Query 44483 TATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAAC 44542
|||| | |||| || || ||||||||| |||||| | || ||||| ||||||
Sbjct 167249 TATAATACCAAAAATCCATTCTCATTTATGGAATTTATTTCACTTGAGGGCAAGACAAAC 167190
Query 44543 TTTTTTGAAAAACGCGTTGGAGAATATCA 44571
|| || ||| | ||||| ||||||||
Sbjct 167189 TTCTTCGAACGAAAGGTTGGTGAATATCA 167161
>seq10553
Length=1873
Score = 172 bits (190), Expect = 4e-38
Identities = 273/390 (70%), Gaps = 6/390 (2%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|| ||||||||||| ||||| |||| || | || ||||| ||| | |||| ||||
Sbjct 1422 CCGAAAATTGTAAACGGTCCACAAATTTTGGACAAGTATGTTGGTGAGAGTGAAGCAAAT 1363
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCT 19548
| || | | ||||| || || ||||||||| |||| | ||||| | || || |
Sbjct 1362 ATCCGTAGACTTTTTGCGGATGCAGAAGAAGAAGAAAAGAGATTAGGTCCAAATAGCGGT 1303
Query 19549 TTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCT---GGT 19605
| |||||||| ||| | |||||| | || || || ||||| |||||||| | |
Sbjct 1302 CTCCACATTATCATATTCGATGAAATCGATGCTATTTGTAAATCTCGAGGTTCTGTGGCT 1243
Query 19606 GTAAA---TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTT 19662
| ||| ||| || ||||| || ||||| |||||| | || | || | |||||||||
Sbjct 1242 GGAAATTCTGGCGTCCATGATACGGTTGTGAATCAATTATTGGCTAAGATCGACGGTGTT 1183
Query 19663 AACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGC 19722
| ||| | ||||| ||||| || || || ||||| ||| ||| || | || |||
Sbjct 1182 GAACAATTAAATAACATTTTGGTCATCGGTATGACAAATCGACGTGACATGATTGACGAA 1123
Query 19723 GCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGT 19782
|| || | ||||| ||| | |||||| | |||| |||||| ||| || ||||| |
Sbjct 1122 GCTTTGATGCGACCTGGTAGATTGGAAGTTCAGATGGAAATTGGCTTGCCTAATGAACCT 1063
Query 19783 GGACGTGTGGAAATTTTAAACATACATACA 19812
||| | || |||||||||| || ||||||
Sbjct 1062 GGAAGAGTACAAATTTTAAATATTCATACA 1033
>seq933
Length=47053
Score = 95.1 bits (104), Expect = 1e-14
Identities = 246/368 (67%), Gaps = 14/368 (4%)
Strand=Plus/Plus
Query 47226 TTTTAGGACTTTATGAAA--AATCAGGGAAAATATTATTTCTCGGGTTAGACAATGCAGG 47283
|||||||| ||||| || |||| || ||| ||||||| | || ||||| ||||| ||
Sbjct 35525 TTTTAGGA--TTATGGAAGAAATCTGGCAAATTATTATTCTTGGGATTAGATAATGCTGG 35582
Query 47284 AAAAACGGCATTACTCCACATGCTCAAATACAATTGCATGAAAGAGCATAACCCTACATT 47343
|||||| || | || |||||||| ||| | | | | | | ||| || ||| |
Sbjct 35583 TAAAACGACACTTCTTCACATGCTTAAAGATGACAGATTAGCACAACATGTTCCAACACT 35642
Query 47344 ACATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCACATTTGATTTAGG 47403
|||||||| || || |||| | || | || |||| ||||||||||||||
Sbjct 35643 TCATCCGACATCAGAGGAACTGTCCATAGGAAATATGCGTTTTACAACATTTGATTTAGG 35702
Query 47404 AGGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATGTCGTTGATGCTATAGT 47463
||||| | ||||| ||| | ||||| | |||| |||| | || ||||| || ||
Sbjct 35703 TGGACATACGCAAGCTCGTCGTGTGTGGAAGGATTACTTTCCAGCTGTCGATGCAATTGT 35762
Query 47464 TTATATTGTAGACTGTGCA---GATTTGACTAGACTGACAG--AGGCAAAAATCGAATTC 47518
| | || | || |||| ||| | | | || ||| | || |||||||||||
Sbjct 35763 CTTTCTTATTGA---TGCATGGGATCGAAGTCG-CTTCCAGGAAAGC-AAAATCGAATTG 35817
Query 47519 GATGCGTTGTTAAACGATGAACTGTTACACGATGTTCCTATTTTAGTGTTGGGCAATAAA 47578
||| | ||||||| || ||| ||| || ||| || | | ||||| ||||||
Sbjct 35818 GATTCATTGTTAACGGACGAAGCTTTATCGAATTGTCCCGTTCTCATATTGGGGAATAAA 35877
Query 47579 ATCGACAA 47586
|| |||||
Sbjct 35878 ATTGACAA 35885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397329935030125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |