Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq17255 104 3e-17 >seq17255 Length=1118 Score = 104 bits (114), Expect = 3e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || || | || || || |||||||| | || |||||| || Sbjct 135 AATGCAAATTTTCGTTAAAACATTAACTGGTAAAACTATTACCTTGGAAGTTGAGCCATC 76 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| |||| | ||||||||||| || || ||||| |||||||| |||||||| Sbjct 75 TGATACTATTGAAAATGTAAAGGCTAAAATCCAAGATAAGGAAGGAATTCCACCAGACCA 16 Query 27525 GCAGCGTCTAATTTT 27539 |||||| | || || Sbjct 15 ACAGCGTTTGATCTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570124870898000