Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq767 93.3 3e-14 >seq767 Length=55330 Score = 93.3 bits (102), Expect = 3e-14 Identities = 215/316 (68%), Gaps = 16/316 (5%) Strand=Plus/Minus Query 126081 TGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCT-CAAGTCC 126139 ||||| | |||||||| ||||| ||||| ||||||| || ||||| || ||| | Sbjct 37972 TGATTCGTGTAAATATGAGCATCGCCAAAAGTATGAACAAAATCACCAGGCTTCAAATTT 37913 Query 126140 ACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACC 126199 | | | |||| | | |||| ||| ||||| |||||||||||||||||| || Sbjct 37912 GTAA-CATGAGCAATCATGTACGTCAATAAGGCATACGATGCAATATTGAAAGGAACTCC 37854 Query 126200 TAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTCTTGTACGTA 126259 | | |||||||| |||||| |||||||| || | |||| ||| | || || Sbjct 37853 AAGACCCATATCAGCTGATCTTTGGTATAATTGGCAGCTCAATTCACCATTAGCGACATA 37794 Query 126260 AAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATT----GAATCGATTTCAGTAGGAT 126315 |||||||| | ||| || ||||| | ||||||| |||| | || | |||| Sbjct 37793 AAATTGAACGAGACAGTGACATGGTGGAAGTGCCATTTGTGGAAT---GTCCACT-GGAT 37738 Query 126316 TCCAT--GCTGAA-ACAATGTGACGTCGAGAGTTTGGATTGGTTTTAATTTGTTGTATAA 126372 ||||| ||| || | ||| ||| ||| |||||||||| ||| || ||| || | Sbjct 37737 TCCATGCGCTCAATATAAT---ACGACGATCATTTGGATTGGCTTTGATGCGTTCAATGA 37681 Query 126373 CTGATTTTAATTGATC 126388 | |||||||| || Sbjct 37680 CATCCTTTAATTGGTC 37665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408468800887175