Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_029119.1
Length=127726
Score E
Sequences producing significant alignments: (Bits) Value
seq767 93.3 3e-14
>seq767
Length=55330
Score = 93.3 bits (102), Expect = 3e-14
Identities = 215/316 (68%), Gaps = 16/316 (5%)
Strand=Plus/Minus
Query 126081 TGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCT-CAAGTCC 126139
||||| | |||||||| ||||| ||||| ||||||| || ||||| || ||| |
Sbjct 37972 TGATTCGTGTAAATATGAGCATCGCCAAAAGTATGAACAAAATCACCAGGCTTCAAATTT 37913
Query 126140 ACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACC 126199
| | | |||| | | |||| ||| ||||| |||||||||||||||||| ||
Sbjct 37912 GTAA-CATGAGCAATCATGTACGTCAATAAGGCATACGATGCAATATTGAAAGGAACTCC 37854
Query 126200 TAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTCTTGTACGTA 126259
| | |||||||| |||||| |||||||| || | |||| ||| | || ||
Sbjct 37853 AAGACCCATATCAGCTGATCTTTGGTATAATTGGCAGCTCAATTCACCATTAGCGACATA 37794
Query 126260 AAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATT----GAATCGATTTCAGTAGGAT 126315
|||||||| | ||| || ||||| | ||||||| |||| | || | ||||
Sbjct 37793 AAATTGAACGAGACAGTGACATGGTGGAAGTGCCATTTGTGGAAT---GTCCACT-GGAT 37738
Query 126316 TCCAT--GCTGAA-ACAATGTGACGTCGAGAGTTTGGATTGGTTTTAATTTGTTGTATAA 126372
||||| ||| || | ||| ||| ||| |||||||||| ||| || ||| || |
Sbjct 37737 TCCATGCGCTCAATATAAT---ACGACGATCATTTGGATTGGCTTTGATGCGTTCAATGA 37681
Query 126373 CTGATTTTAATTGATC 126388
| |||||||| ||
Sbjct 37680 CATCCTTTAATTGGTC 37665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408468800887175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |