Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq767 86.0 6e-12 >seq767 Length=55330 Score = 86.0 bits (94), Expect = 6e-12 Identities = 172/255 (67%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 34545 TGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCT 34604 || |||| ||||| || ||| | || | ||||| || || || || ||| ||| Sbjct 37726 TGAGCGCATGGAATCCAGTGGACATTCCACAAATGGCACTTCCACCATGTCACTGTCTCG 37785 Query 34605 GCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACA 34664 ||||| || ||||| ||||| || || |||||| | || ||| |||| | || | Sbjct 37786 TTCAATTTTATGTCGCTAATGGTGAATTGAGCTGCCAATTATACCAAAGATCAGCTGATA 37845 Query 34665 TGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTC 34724 |||| | || || || ||||| ||||| || || | | ||||||||||| |||| Sbjct 37846 TGGGTCTTGGAGTTCCTTTCAATATTGCATCGTATGCCTTATTGACGTACATGATTGCTC 37905 Query 34725 ATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACC 34784 |||| ||| ||||| || | || ||||| || || ||||| ||||| ||| Sbjct 37906 ATGTTACAAATTTGAAGCCTGGTGATTTTGTTCATACTTTTGGCGATGCTCATATTTACA 37965 Query 34785 TGAACCACATCGAGC 34799 ||| |||| |||| Sbjct 37966 CGAATCACACTGAGC 37980 Score = 86.0 bits (94), Expect = 6e-12 Identities = 172/255 (67%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAA 6605 |||| |||| ||| ||| ||||| ||||| || || ||||| || | || ||||| Sbjct 37980 GCTCAGTGTGATTCGTGTAAATATGAGCATCGCCAAAAGTATGAACAAAATCACCAGGCT 37921 Query 6606 CCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACG 6665 ||| |||||||| ||||||||||| | | || || ||||| ||||| | Sbjct 37920 TCAAATTTGTAACATGAGCAATCATGTACGTCAATAAGGCATACGATGCAATATTGAAAG 37861 Query 6666 GCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCG 6725 | || || | ||||| || | |||| ||| || | |||||| || || ||||| | Sbjct 37860 GAACTCCAAGACCCATATCAGCTGATCTTTGGTATAATTGGCAGCTCAATTCACCATTAG 37801 Query 6726 CGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCG 6785 |||| || ||||| ||| ||| || || || || ||||| | || | ||| | Sbjct 37800 CGACATAAAATTGAACGAGACAGTGACATGGTGGAAGTGCCATTTGTGGAATGTCCACTG 37741 Query 6786 GGTTCCACGCGCACA 6800 | ||||| |||| || Sbjct 37740 GATTCCATGCGCTCA 37726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448116574638000