Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq767 141 8e-29
>seq767
Length=55330
Score = 141 bits (156), Expect = 8e-29
Identities = 229/326 (70%), Gaps = 10/326 (3%)
Strand=Plus/Minus
Query 118374 AAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGAT-----AGT 118428
|||||||||||||||||| || || ||||| || | |||| | ||| | |
Sbjct 38078 AAAATCTTCAAACTTAAAATCATCGATATTA--GAAA--CTTGACGCTTGATTTTCAACT 38023
Query 118429 GTGGGAAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATA 118488
||||||| || | |||| | | |||||| ||||| ||||||| |||||||| |
Sbjct 38022 GTGGGAAT-GGACGTGGCTTACGTTCGAGTTGCTCTTTCAATGGCTCAGTGTGATTCGTG 37964
Query 118489 TAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGA 118548
|| | ||||||||| |||| ||||| | || |||||||| | | ||| | |||
Sbjct 37963 TAAATATGAGCATCGCCAAAAGTATGAACAAAATCACCAGGCTTCAAATTTGTAACATGA 37904
Query 118549 GCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATG 118608
||||||||||| ||||| || || || | ||| |||||||| || ||||||||
Sbjct 37903 GCAATCATGTACGTCAATAAGGCATACGATGCAATATTGAAAGGAACTCCAAGACCCATA 37844
Query 118609 TCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTGACTT 118668
|| |||||||| ||||| |||||||| | || || || || |||||||| |||
Sbjct 37843 TCAGCTGATCTTTGGTATAATTGGCAGCTCAATTCACCATTAGCGACATAAAATTGAACG 37784
Query 118669 ATGATGTGACATGGAGGCAGAACCAT 118694
| ||||||||| || || ||||
Sbjct 37783 AGACAGTGACATGGTGGAAGTGCCAT 37758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414345336378100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |