Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq767 141 8e-29 >seq767 Length=55330 Score = 141 bits (156), Expect = 8e-29 Identities = 229/326 (70%), Gaps = 10/326 (3%) Strand=Plus/Minus Query 118374 AAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGAT-----AGT 118428 |||||||||||||||||| || || ||||| || | |||| | ||| | | Sbjct 38078 AAAATCTTCAAACTTAAAATCATCGATATTA--GAAA--CTTGACGCTTGATTTTCAACT 38023 Query 118429 GTGGGAAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATA 118488 ||||||| || | |||| | | |||||| ||||| ||||||| |||||||| | Sbjct 38022 GTGGGAAT-GGACGTGGCTTACGTTCGAGTTGCTCTTTCAATGGCTCAGTGTGATTCGTG 37964 Query 118489 TAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGA 118548 || | ||||||||| |||| ||||| | || |||||||| | | ||| | ||| Sbjct 37963 TAAATATGAGCATCGCCAAAAGTATGAACAAAATCACCAGGCTTCAAATTTGTAACATGA 37904 Query 118549 GCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATG 118608 ||||||||||| ||||| || || || | ||| |||||||| || |||||||| Sbjct 37903 GCAATCATGTACGTCAATAAGGCATACGATGCAATATTGAAAGGAACTCCAAGACCCATA 37844 Query 118609 TCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTGACTT 118668 || |||||||| ||||| |||||||| | || || || || |||||||| ||| Sbjct 37843 TCAGCTGATCTTTGGTATAATTGGCAGCTCAATTCACCATTAGCGACATAAAATTGAACG 37784 Query 118669 ATGATGTGACATGGAGGCAGAACCAT 118694 | ||||||||| || || |||| Sbjct 37783 AGACAGTGACATGGTGGAAGTGCCAT 37758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414345336378100