Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq343 574 7e-159
seq119 320 2e-82
seq205 100 4e-16
>seq343
Length=103200
Score = 574 bits (636), Expect = 7e-159
Identities = 1146/1679 (68%), Gaps = 39/1679 (2%)
Strand=Plus/Plus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
||||||||||| | | | ||||||||||| |||| || ||||| |||||||| ||
Sbjct 5020 GTAAACTGAATAGCATTTGCAGCGGGTTTTGTTCGTAAGTAATACATTCCAGTTTTCAGT 5079
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901
|||| |||||||||| ||||| ||| || | ||| |||| | || || |||| |
Sbjct 5080 CCCATTTTCCATCCGTAAAAATGAATGGACGTTAATTTCCCATAATTGGGTTCAGCTACA 5139
Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961
|||||||| | |||||||||||| || || |||||||| | ||| || | ||||| ||
Sbjct 5140 TGAATATTAAACGACTGACTTTGGTCTATAAAAGCTCCACGATCGGCAGACATTTGAAT- 5198
Query 76962 ATGGTCTTTTGA--GGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019
| || | |||| | ||||||||||| ||||| | | | ||| |||||||||||||
Sbjct 5199 -TTGTGTCTTGACGGAAATTTCCCAAACCGTTTTATATATATTTTTTATATCATCTGGAA 5257
Query 77020 GGTTTG-----TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATC 77074
|||| || | || || |||||| || || |||||| | ||||| ||||| ||
Sbjct 5258 --TTTGCTCAATAGTCTGTATTGAACCATTATTTGCAATAATTTTGTTCTTCATATCGTC 5315
Query 77075 ATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTC 77134
|| ||| || | || || ||| | | | ||||| ||||||| | |||||||||
Sbjct 5316 ATCCCATAAACCACGTTCAGTCAAATCCTTGATAAGATGGTGATTAACAACTTGAAATTC 5375
Query 77135 TCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT-TCATTGT 77193
||| | || | |||| | |||| |||||| || || |||| || || | ||||| |
Sbjct 5376 ACCACTGAGAACACGACGATTATAAACATTACTTGTGTAAGGTT-CAAAGCTCTCATTAT 5434
Query 77194 TTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGA 77253
| |||||||| |||||||| || || || ||||| ||||| | || | ||||| ||
Sbjct 5435 TACCCAAAATCTGAGCAGTTGATGCTGTCGGCATTGGTGCAATTAAGAGTGAATTTCGGA 5494
Query 77254 GACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAA 77313
||||| || | ||||| ||||||||| || ||||||||| | ||| | ||
Sbjct 5495 GACCAAACTTTTTAATTTTTTCTTTTAGAGCTTCCCAATCCCACAAATCGGTGGGAGTCT 5554
Query 77314 CATCCCAAAGATCGTATTGTAGAATTCCGTT--ACTAGCATATGATCCATTATATGTTTC 77371
|||||| | ||| ||||||| | || || || | | | |||||| || || ||
Sbjct 5555 TATCCCACATATCATATTGTAATACACCTTTTGAC-ACCGGA-CATCCATCGTAAGTCTC 5612
Query 77372 ATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGT 77431
||| ||||| | ||| |||| |||||| || | |||||||| || |||||||||||
Sbjct 5613 ATATGGTCCCAATTGTTCTGCTAATTCACAGCTGGACTCCAATGCACCATAATAAATTGT 5672
Query 77432 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGG-ATAATGTAAAA 77490
||| || || | | ||| | || || ||||| || ||| | || || | | |
Sbjct 5673 TTCAAATATTTGTTGATTTAAATTTTTCGCTTCGTTAGATTCATATGGCATTCT-CATCA 5731
Query 77491 GAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGG 77550
|||||| |||||||| ||||| ||||||||||| |||||||| | |||||| || |
Sbjct 5732 AAATAAAAGCATCTGCCAATCCTTGAACTCCAATTCCAATAGGACGATGTCTAAAGTTTG 5791
Query 77551 AAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAA 77610
| |||||||||| || ||||| ||||| | || ||||||||||| | ||| ||
Sbjct 5792 ACCGTTTAGCTTCTTCAACGGGATAGTAATTTACGTTAATAATTTTATTCAAATTCCTTG 5851
Query 77611 CAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA---TCTTCCA---TCTATAA 77664
|||| ||| || ||||| | ||| |||| ||| | ||||| | | | | |
Sbjct 5852 TGACTATTTTTGTAACTTCCTTCAATTTGTGAAAGTCATATTCTCTTCGATTTTGTTTGA 5911
Query 77665 CAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCAT 77724
||||||| || ||||| || ||||||| |||||||||||| || |||| | | ||
Sbjct 5912 CAAACATATTTAAAGCAATTGATGCTAAATTACAAACTGCAACTTCATCCTTACTTGAAT 5971
Query 77725 ATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGC 77784
|||||| ||| || ||||||| ||| ||| || || || ||||| ||||| ||
Sbjct 5972 ATTGTACTATTTCCGTACATAAATTCGAACAACGTATTGTCCCAAGATTCTGTTGATTTG 6031
Query 77785 TCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATT 77844
|| |||||||| |||||||| || ||| | || || || ||||| | || | |
Sbjct 6032 ATTTCCGGTTGCATGAATCCTTATACAGCATATAAGGTGTACCAGTTTCTACTTGAGCCT 6091
Query 77845 CGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCTC--TCTCT 77902
| || || | ||| | || || |||| | || ||| | || |||
Sbjct 6092 CAATGATTGCGAACCACAAATCTTGTGCCTTTA--CTTGACGAATATACCTTCCTTCTGC 6149
Query 77903 TTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCA 77962
|||||| ||| || ||||||| || || | ||| | || || |
Sbjct 6150 TTCATAGCCTTCATAAAGTTTCACAAATTCCTCACCGTACGATTCAAAAAGACCGGGACT 6209
Query 77963 TTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATC 78022
||| || ||||| |||||||| ||| | | ||| || ||| || | |||
Sbjct 6210 ACTATTAGGACACATTAATGACCACATTTCATTGTTTTCAACCCGACGCATGAACAAATC 6269
Query 78023 AGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTT 78082
|| ||||| | ||| ||| | |||| | ||| |||||| ||||| ||||| ||
Sbjct 6270 TGGAATCCACAATGCATAAAACATGTCTCTAGCTCTGACTTCTTCTTTTCCAGTATTTTT 6329
Query 78083 TTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAAC 78142
|| | ||| ||||| || | ||||||| |||||| ||||| | ||||||||| | |
Sbjct 6330 CTTTAAATCCAGAAATTCAAAAATATCACCATGCCAAGGTTCCAAATATATTGCAAACGC 6389
Query 78143 TCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAA 78202
|| || |||||||| || || || || | ||| | ||||| ||||| || ||||| ||
Sbjct 6390 GCCTGGACGTTTATTTCCACCTTGGTCAACATAACGTGCGGTATTATTGTATACTCTTAA 6449
Query 78203 CATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCG 78262
|||||||| || || || || | |||||||| |||| ||||| |||| |||| ||
Sbjct 6450 CATTGGAACAAGGCCATTTGAAATCCCATTTGTACCAGCTATATATGTTCCTTTTGCTCG 6509
Query 78263 AATATTACTAATGGATAT----CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAAC 78318
||| |||| | || || ||||| ||||| || ||||| |||||
Sbjct 6510 AAT----GCAATGAACATTAACACCAATTCCACCTGCTGATTTGCTTATTAATGCGCATT 6565
Query 78319 GTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA-TGTTAAGAAGAAAACAG 78377
|||| |||||||| || |||||||| ||| ||||| || || || ||| || ||
Sbjct 6566 GTTTTAATGTATCATAAATACCCTCAATAGAATCATCTGACATTGATAGTAAG-AAGCAT 6624
Query 78378 CTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAA 78436
|| | |||| | | ||| | || ||||| || |||||||||||||||||
Sbjct 6625 GAGGATAATTGAGGGCGTGGCGTTGCAGCTGCGAATAAAGTTGGAGATGCATGCGTAAA 6683
>seq119
Length=197918
Score = 320 bits (354), Expect = 2e-82
Identities = 584/838 (70%), Gaps = 23/838 (3%)
Strand=Plus/Plus
Query 47834 AGACATAACTCCCATTTTTTGATATTCACCCACACGTTTC--TCGAAAAAATTAGTTTTG 47891
|||||||||||| | |||||||||||||| || |||| ||||| || || || |||
Sbjct 167142 AGACATAACTCCACTCTTTTGATATTCACCAACC--TTTCGTTCGAAGAAGTTTGTCTTG 167199
Query 47892 CCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttA 47951
|| || | ||| ||| ||||||||| |||||||| | |||||| | ||| | |
Sbjct 167200 CCCTCAAGTGAAATAAATTCCATAAATGAGAATGGATTTTTGGTATTATAGACTTTATCA 167259
Query 47952 AATCCTAATTCTGA-AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTC 48010
| ||| ||||| ||| | | ||| ||||| |||||||| || |||| | ||
Sbjct 167260 AGTCCCAATTCACCCAATAAATG-ATCAGCAACAAATTCTATGTACTGAGTCATTAAATC 167318
Query 48011 ACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGT 48070
||||||||| || | | |||||||| || || || || | ||| || | || || |
Sbjct 167319 ACAATTCATGCCCAACATCTTAACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTT 167378
Query 48071 GACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAA--CAA-ATG 48127
||||| || || || ||| |||||| ||||||| | | ||| |||
Sbjct 167379 TACAGCCTCTGTGATAATTTCAACTACTCTTTCCT---TTGGTGGCTTCTGTTCAAGATG 167435
Query 48128 TTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTT 48187
||| ||||||| |||||||| |||| |||||| ||||| ||||| ||| | ||| ||
Sbjct 167436 TTTGTACATTAAGCATGCAAAGTCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCATT 167495
Query 48188 AGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGA 48247
|||||||| | || ||||||| ||| | || || | ||||||||| || || ||||
Sbjct 167496 TGAAAATGTCAACCCTGGCATTAATCCTCTCTTCTTAATCCAAAATATAGCTGC-AAAGC 167554
Query 48248 T-CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG 48306
| ||| |||||| || ||||| || || ||||| || ||| || || || | | |
Sbjct 167555 TACCACTAAAGAAAATCCCTTCGACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTTG 167614
Query 48307 CTTCGTTG-TG--TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTG 48363
| | ||| || |||||| | ||||| |||||||||||||| ||||| || | ||
Sbjct 167615 CATTCTTGCTGGATATCCAATTTAAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGTG 167674
Query 48364 TTTCTATAGCATTAAAGAGAAAGttttttt-CATTGCTATCTTTAACGTAAGTATCTATT 48422
| || || ||||| || | |||| | | |||| |||| ||| ||||| || |||
Sbjct 167675 TCTCAATTGCATTGAATAAGAAGTCACGCTGCTTTGC-ATCTCTAATATAAGTTTCAATT 167733
Query 48423 AAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACAT 48482
|| | ||||| || ||||| | |||||| || || || || ||||| || || ||
Sbjct 167734 AATATTGAGTACATCTCCGAGTGTACATTTTCCATAGCAATTTGGAATCCATAGAAGAAT 167793
Query 48483 CTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATT 48542
| ||||||| | || || ||| || || || ||| |||||||||||||| ||
Sbjct 167794 CGAGCTTCTGGAACTTGAACTTCCTGACTGAAACGCTCAATTAAATTCTCATTTACGATG 167853
Query 48543 CCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGA--AG 48600
|||||| |||||||| || ||||||||||| ||||||| || || |
Sbjct 167854 CCATCAGATGCAGCAAAGAAAGCTAATACATGCGAGATAAAATGACGCTC--TGAATCCT 167911
Query 48601 TCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAA 48658
| || || |||||||| | ||||||||||||| ||| ||||| || ||||||| ||
Sbjct 167912 TGAGATTGTTCCAGTCTTCCATATCTTTTGATAAATCGACTTCCTCGACTGTCCAGAA 167969
>seq205
Length=143123
Score = 100 bits (110), Expect = 4e-16
Identities = 123/166 (74%), Gaps = 3/166 (2%)
Strand=Plus/Minus
Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205
||| |||| ||| || |||||||||| ||| | |||||| ||||| || | || ||
Sbjct 86382 AAAGTCACGATGTAGTCCTTCATCTCGTGAAATGAGTTCGTTTGAAAAAGTCAATCCAGG 86323
Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAG--AAAAGAATATG 48263
||||||||| || ||||| ||| |||| ||||| || |||| | | | |||| |||||
Sbjct 86322 CATTAGTCCTCGCTTTTTTAGCTAAAAGATTGCTGC-AAAGCTTCTGCTAAAAAAATATA 86264
Query 48264 CCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTT 48309
|||||| || |||||||| ||| ||| || || | ||| |||
Sbjct 86263 ATTTCTACAGCGGCAAATGCAATAATTCTTTCACCCAATCTGCCTT 86218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694442815556000
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