Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq343 545 3e-150
seq119 316 3e-81
seq205 102 1e-16
>seq343
Length=103200
Score = 545 bits (604), Expect = 3e-150
Identities = 1091/1599 (68%), Gaps = 32/1599 (2%)
Strand=Plus/Plus
Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431
|||| || |||||||| | | | || |||||||| |||| || ||||| |||||||
Sbjct 5015 CAACAGTAAACTGAATAGCATTTGCAGCGGGTTTTGTTCGTAAGTAATACATTCCAGTTT 5074
Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491
| || |||| |||||||||| ||||| ||| |||| ||| |||| | || || |
Sbjct 5075 TCAGTCCCATTTTCCATCCGTAAAAATGAATGGACGTTAATTTCCCATAATTGGGTTCAG 5134
Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551
||| ||||||||| | |||||||||||| || || |||||||| | ||| || | |||||
Sbjct 5135 CTACATGAATATTAAACGACTGACTTTGGTCTATAAAAGCTCCACGATCGGCAGACATTT 5194
Query 75552 TTATAATGGTCTTTTGA--GGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATC 75609
|| | || | |||| | ||||||||||| ||||| | | | ||| ||||||||
Sbjct 5195 GAAT--TTGTGTCTTGACGGAAATTTCCCAAACCGTTTTATATATATTTTTTATATCATC 5252
Query 75610 TGGAAGATTTG-----TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATC 75664
|||| ||||| || | || || || || || | |||||| | ||||| ||
Sbjct 5253 TGGA--ATTTGCTCAATAGTCTGTATTGAACCATTATTTGCAATAATTTTGTTCTTCATA 5310
Query 75665 TCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGA 75724
|| |||| ||| || | || || ||| | | | ||||| ||||||||| ||||
Sbjct 5311 TCGTCATCCCATAAACCACGTTCAGTCAAATCCTTGATAAGATGGTGATTAACAACTTGA 5370
Query 75725 AATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT-TC 75783
||||| ||| | || | ||| | |||| |||||| || || |||| || || | ||
Sbjct 5371 AATTCACCACTGAGAACACGACGATTATAAACATTACTTGTGTAAGGTT-CAAAGCTCTC 5429
Query 75784 ATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATT 75843
||| || |||||||| ||||||||||| || |||||||| ||||| | || | |||
Sbjct 5430 ATTATTACCCAAAATCTGAGCAGTTGATGCTGTCGGCATTGGTGCAATTAAGAGTGAATT 5489
Query 75844 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGG 75903
|| ||||||| || | ||||| ||||||||| || ||||||||| | ||| | ||
Sbjct 5490 TCGGAGACCAAACTTTTTAATTTTTTCTTTTAGAGCTTCCCAATCCCACAAATCGGTGGG 5549
Query 75904 TACAACATCCCAGAGATCGTATTGTAGAATTCC-GTTGCTAGCATATGATCCATTATATG 75962
|||||| | ||| ||||||| | || ||| | | | |||||| || |
Sbjct 5550 AGTCTTATCCCACATATCATATTGTAATACACCTTTTGACACCGGA-CATCCATCGTAAG 5608
Query 75963 TTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAA 76022
| || || | || | ||| |||| ||| || || | ||| || ||||| |||||||
Sbjct 5609 TCTCATATGGTCCCAATTGTTCTGCTAATTCACAGCTGGACTCCAATGCACCATAATAAA 5668
Query 76023 TTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGG-ATAATGT 76081
||||||| || || | | ||| | || || |||||| | ||| | || || |
Sbjct 5669 TTGTTTCAAATATTTGTTGATTTAAATTTTTCGCTTCGTTAGATTCATATGGCATTCT-C 5727
Query 76082 AAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 76141
| | |||||| |||||||| | ||| ||||||||||| |||||||| | ||||||
Sbjct 5728 ATCAAAATAAAAGCATCTGCCAATCCTTGAACTCCAATTCCAATAGGACGATGTCTAAAG 5787
Query 76142 TTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT 76201
|| || || ||||||| || || || ||||| | | ||||||||||| | |||
Sbjct 5788 TTTGACCGTTTAGCTTCTTCAACGGGATAGTAATTTACGTTAATAATTTTATTCAAATTC 5847
Query 76202 CTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATT---TTCCA---TCT 76255
|| |||| ||| || ||||| | |||| |||| ||| ||| ||| | | |
Sbjct 5848 CTTGTGACTATTTTTGTAACTTCCTTCAATTTGTGAAAGTCATATTCTCTTCGATTTTGT 5907
Query 76256 ATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTG 76315
| ||||||||||| | ||| || ||||||| ||||||||| || || |||| | |
Sbjct 5908 TTGACAAACATATTTAAAGCAATTGATGCTAAATTACAAACTGCAACTTCATCCTTACTT 5967
Query 76316 GCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGG 76375
| |||||||| ||| ||||| |||| ||| ||| || || |||||||| |||||
Sbjct 5968 GAATATTGTACTATTTCCGTACATAAATTCGAACAACGTATTGTCCCAAGATTCTGTTGA 6027
Query 76376 TTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGT 76435
|| || ||| ||||| |||||||| || | | | || || |||||||| | ||
Sbjct 6028 TTTGATTTCCGGTTGCATGAATCCTTATACAGCATATAAGGTGTACCAGTTTCTACTTGA 6087
Query 76436 GATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTC--T 76493
| || || || | ||| | || || |||| | || ||| |||| |
Sbjct 6088 GCCTCAATGATTGCGAACCACAAATCTTGTGCCTTTA--CTTGACGAATATACCTTCCTT 6145
Query 76494 CTCTTTCATATTGTGTATATAACCGTT--CAAATTCATCTCCCCAAACATCATCCAAACC 76551
|| |||||| | | |||| || ||||||| || || | ||| | |||
Sbjct 6146 CTGCTTCATA--GCCTTCATAAAGTTTCACAAATTCCTCACCGTACGATTCAAAAAGACC 6203
Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAA 76611
|||| ||| |||||||| ||||||||| ||| | | |||||| ||| ||
Sbjct 6204 GGGACTACTATTAGGACACATTAATGACCACATTTCATTGTTTTCAACCCGACGCATGAA 6263
Query 76612 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGT 76671
| ||| || ||||| | ||| ||| | |||| | ||| |||||| ||||| ||
Sbjct 6264 CAAATCTGGAATCCACAATGCATAAAACATGTCTCTAGCTCTGACTTCTTCTTTTCCAGT 6323
Query 76672 ATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGC 76731
||| || || | ||| || || || | ||||||| |||||| ||||| | |||||| ||
Sbjct 6324 ATTTTTCTTTAAATCCAGAAATTCAAAAATATCACCATGCCAAGGTTCCAAATATATTGC 6383
Query 76732 CATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAAC 76791
| | || || |||||||| || || || || | ||| | || || ||||| || ||
Sbjct 6384 AAACGCGCCTGGACGTTTATTTCCACCTTGGTCAACATAACGTGCGGTATTATTGTATAC 6443
Query 76792 TCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACA 76851
||| |||||||||| || ||| || || | |||||||| |||| ||||| ||||
Sbjct 6444 TCTTAACATTGGAACAAGGCCATTTGAAATCCCATTTGTACCAGCTATATATGTTCCTTT 6503
Query 76852 TGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACA 76911
||| ||||| | || | | || ||||| ||||| ||| |||| || ||
Sbjct 6504 TGCTCGAATGCAATGAACATTAACACCAATTCCACCTGCTGATTTGCTTATTAATGCGCA 6563
Query 76912 GCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATC 76950
|||| ||||| ||||| || ||||| ||| ||||||
Sbjct 6564 TTGTTTTAATGTATCATAAATACCCTCAATAGAATCATC 6602
>seq119
Length=197918
Score = 316 bits (350), Expect = 3e-81
Identities = 583/839 (69%), Gaps = 27/839 (3%)
Strand=Plus/Plus
Query 46324 GACATAACTCCCATTTTTTGGTATTCACCTACACGTTTC--TCGAAAAAATTAGTTTTGC 46381
||||||||||| | ||||| |||||||| || |||| ||||| || || || ||||
Sbjct 167143 GACATAACTCCACTCTTTTGATATTCACCAACC--TTTCGTTCGAAGAAGTTTGTCTTGC 167200
Query 46382 CTTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAA 46441
| || | ||| ||| ||||||||| || ||||| | |||||| | ||| | ||
Sbjct 167201 CCTCAAGTGAAATAAATTCCATAAATGAGAATGGATTTTTGGTATTATAGACTTTATCAA 167260
Query 46442 ATCCTAATTCTGA-AATCAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCA 46500
||| ||||| ||| | | ||| ||||| |||||||| ||| |||| | |||
Sbjct 167261 GTCCCAATTCACCCAATAAATG-ATCAGCAACAAATTCTATGTACTGAGTCATTAAATCA 167319
Query 46501 CAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTG 46560
|||||||| || | | || || || || || || || | ||| || | ||||| |
Sbjct 167320 CAATTCATGCCCAACATCTTAACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTTT 167379
Query 46561 ACAGCATCCG--ATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGCA--TCAA-AT 46615
||||| || | ||| | || | |||| |||||| ||||||| | | |||| ||
Sbjct 167380 ACAGCCTCTGTGATAATTTCAAC--TACTCTTTCCT---TTGGTGGCTTCTGTTCAAGAT 167434
Query 46616 GTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGT 46675
|||| ||||||| |||||||| |||| |||||| ||||| ||||| ||| | ||| |
Sbjct 167435 GTTTGTACATTAAGCATGCAAAGTCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCAT 167494
Query 46676 TAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAG 46735
| |||||||| | ||| ||||||| ||| | ||| || | |||||||||||| || ||||
Sbjct 167495 TTGAAAATGTCAACCCTGGCATTAATCCTCTCTTCTTAATCCAAAATATAGCTGC-AAAG 167553
Query 46736 AT-CCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTG 46794
| ||| |||||| || ||||| ||||| || || || | || || || || | |
Sbjct 167554 CTACCACTAAAGAAAATCCCTTCGACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTT 167613
Query 46795 GCA-TCATTATG--AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATT 46851
||| || | || ||||| || |||||| |||||||| ||||| ||||| || | |
Sbjct 167614 GCATTCTTGCTGGATATCCAATTTAAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGT 167673
Query 46852 GTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATT 46911
|| || || ||||| || | |||| | | |||| ||| ||| || || |||
Sbjct 167674 GTCTCAATTGCATTGAATAAGAAGTCACGCTGCTTTGCATCTCTAATATAAGTTTCAATT 167733
Query 46912 AAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACAT 46971
|| | ||||| || || || | ||||| ||||| || || ||||| || || ||
Sbjct 167734 AATATTGAGTACATCTCCGAGTGTACATTTTCCATAGCAATTTGGAATCCATAGAAGAAT 167793
Query 46972 CTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATT 47031
| ||||| | || || || || || || || ||| ||||||||||| || ||
Sbjct 167794 CGAGCTTCTGGAACTTGAACTTCCTGACTGAAACGCTCAATTAAATTCTCATTTACGATG 167853
Query 47032 CCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAAT---ATTTTTCATCGGTA 47088
|||||| |||||||| || || |||||||| ||||||| | | |||
Sbjct 167854 CCATCAGATGCAGCAAAGAAAGCTAATACATGCGAGATAAAATGACGCTCTGAATC---C 167910
Query 47089 GTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAA 47147
| || || |||||||| | ||||||||||||| ||| ||||| || ||||||||||
Sbjct 167911 TTGAGATTGTTCCAGTCTTCCATATCTTTTGATAAATCGACTTCCTCGACTGTCCAGAA 167969
>seq205
Length=143123
Score = 102 bits (112), Expect = 1e-16
Identities = 117/155 (75%), Gaps = 3/155 (2%)
Strand=Plus/Minus
Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694
||| |||| ||| || |||||||||| ||| | |||||| ||||| || | |||||
Sbjct 86382 AAAGTCACGATGTAGTCCTTCATCTCGTGAAATGAGTTCGTTTGAAAAAGTCAATCCAGG 86323
Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAG--AAAAGAATATG 46752
||||||||| |||||||| ||| |||| || || || |||| | | | |||| |||||
Sbjct 86322 CATTAGTCCTCGCTTTTTTAGCTAAAAGATTGCTGC-AAAGCTTCTGCTAAAAAAATATA 86264
Query 46753 CCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCC 46787
||||||||| || ||||| | || ||| || ||
Sbjct 86263 ATTTCTACAGCGGCAAATGCAATAATTCTTTCACC 86229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712702473528000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |