Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq442 114 3e-20 >seq442 Length=86436 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 ||||| || |||||||||||||||||||| ||| || || | |||||||||| | Sbjct 25014 TGAAGTGTTGACTCTTTTTGGATGTTGTAGTCGCTCAATGTACGACCATCTTCTAATTGT 25073 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || || ||||| | | ||| || || | | ||||||||||| |||||||| || Sbjct 25074 TTTCCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCCTTATCTTGAATCTTA 25133 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 |||||| | || | |||| || ||| ||||| || ||||| || || ||||| Sbjct 25134 GCCTTGACATTTTCAATCGTGTCAGATGGCTCGACTTCGAGGGTAATTGTCTTACCCGTC 25193 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||||| |||||| Sbjct 25194 AAGGTTTTGACGAAGATCTGCAT 25216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153436063862775