Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq119 334 8e-87
seq205 84.2 2e-11
>seq119
Length=197918
Score = 334 bits (370), Expect = 8e-87
Identities = 615/889 (69%), Gaps = 28/889 (3%)
Strand=Plus/Plus
Query 23161 TAAAAATCTTCATCTAAAGTGAATTTCACTGCTTTATCACTATTCATAACACCCATTTTT 23220
|| ||||| | ||||| ||||| | ||| | |||| |||||| || | |||
Sbjct 167101 TAGAAATCAGCGTCTAATGTGAAAACTTGTTCTTGACGACTAGACATAACTCCACTCTTT 167160
Query 23221 TGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCC 23280
|||||||| ||||| || |||||| || |||||||| ||||| | ||| ||| ||||
Sbjct 167161 TGATATTCACCAACCTTTCGTTCGAAGAAGTTTGTCTTGCCCTCAAGTGAAATAAATTCC 167220
Query 23281 ATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTA-CATGAT--AATTC---CTTT 23334
||||| |||||||| |||||||| || |||| || | ||||| | |
Sbjct 167221 ATAAATGAGAATGGATTTTTGGTATTATAGAC---TTTATCAAGTCCCAATTCACCCAAT 167277
Query 23335 AAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATT 23394
||| | ||| || |||||||| || || ||| ||| |||||| | || || || |
Sbjct 167278 AAATG---ATCAGCAACAAATTCTATGTACTGAGTCATTAAATCACAATTCATGCCCAAC 167334
Query 23395 AGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATT 23454
| || ||||||| || ||| ||| ||| || ||||| ||||| ||| | ||
Sbjct 167335 ATCTTAACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTTTACAGCCTCTGTGATA 167394
Query 23455 ATTTGAACAATAACTTCTTCACTAGGTGGATATTTT---AAATACTTAAACAATAAACAT 23511
|||| ||| | || ||| | ||||| | | | | || || ||| ||| |||
Sbjct 167395 ATTTCAACTA---CTCTTTCCTTTGGTGGCTTCTGTTCAAGATGTTTGTACATTAAGCAT 167451
Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCT 23571
||||| |||| ||| || ||||| || || ||| | |||||| |||||||| || |||
Sbjct 167452 GCAAAGTCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCATTTGAAAATGTCAACCCT 167511
Query 23572 GGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATA 23631
||||||||||||| || |||||||||||||| || ||||| || |||||||||
Sbjct 167512 GGCATTAATCCTCTCTTCTTAATCCAAAATATAGCTGCAAAGCTACCACTAAAGAAAATC 167571
Query 23632 CCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC 23691
|| || ||||| ||||| || | || ||| |||||| ||||||| | || |||
Sbjct 167572 CCTTCGACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTTGCATTCTTGCTGGATATC 167631
Query 23692 CAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAG 23751
|| ||| | ||| | ||||||| || ||||| || ||| |||||||| || ||
Sbjct 167632 CAATTTAAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGTGTCTCAATTGCATTGAAT 167691
Query 23752 AGAAAAGTTTTTTCTTCATT--ATCTGTTATATATGTATCAATTAGTAAACTATACATTT 23809
| | ||| | || | || |||| | ||||| || ||||||| || ||||| |
Sbjct 167692 A-AGAAG-TCACGCTGCTTTGCATCTCTAATATAAGTTTCAATTAATATTGAGTACATCT 167749
Query 23810 CAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATT 23869
| || || | |||||| |||||||| || || ||||| || ||| |||||| | | ||
Sbjct 167750 CCGAGTGTACATTTTCCATAGCAATTTGGAATCCATAGAAGAATCGAGCTTCTGGAACTT 167809
Query 23870 GAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAA 23929
|||| || | | || | | | |||||| || || || || |||||| |||||||
Sbjct 167810 GAACTTCCTGACTGAAACGCTCAATTAAATTCTCATTTACGATGCCATCAGATGCAGCAA 167869
Query 23930 AGAAAGCAAGAACATATTTTATAAAATGTCTTTC---ATCAGTTGATAATTTTTTCCAAT 23986
||||||| | |||| |||||||| | || ||| |||| | || ||||| |
Sbjct 167870 AGAAAGCTAATACATGCGAGATAAAATGACGCTCTGAATC-CTTGAGA--TTGTTCCAGT 167926
Query 23987 CATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGC 24035
| | ||||||||||||||||| ||||| || |||||||| || || ||
Sbjct 167927 CTTCCATATCTTTTGATAAATCGACTTCCTCGACTGTCCAGAAGCTGGC 167975
>seq205
Length=143123
Score = 84.2 bits (92), Expect = 2e-11
Identities = 103/139 (74%), Gaps = 4/139 (3%)
Strand=Plus/Minus
Query 23898 ATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATG 23957
|||||| ||||| || |||||| |||||||| ||||| | |||| ||||| ||
Sbjct 86144 ATTTTCATTAACGATCCCATCAGATGCAGCAAAAAAAGCTAATACATGAGAGATAAATTG 86085
Query 23958 TCTTTCATCAGTTGATAATTTTT-TCCAATCATTAATATCTTTTGATAAATCAACTTCAT 24016
|| ||| || ||| | | |||||| | | ||||| ||||||||||||||||| |
Sbjct 86084 TCGCTCA---GTCTTTAAGTCTAATCCAATAAGTCATATCCTTTGATAAATCAACTTCCT 86028
Query 24017 CAACTGTCCAAAAACTTGC 24035
|||| |||| |||||| ||
Sbjct 86027 CAACAGTCCTAAAACTAGC 86009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521318353435000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |