Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq767 149 8e-31
seq10553 129 8e-25
>seq767
Length=55330
Score = 149 bits (164), Expect = 8e-31
Identities = 297/435 (68%), Gaps = 10/435 (2%)
Strand=Plus/Plus
Query 50475 GGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAAT 50534
|| ||||| || || ||||| || ||||| ||| |||||||||| || || | ||
Sbjct 37575 GGTGATTTGGGTCCAGTTTATGGATTTCAGTGGCGACATTTTGGTGCCAAATATAAAACA 37634
Query 50535 TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTAT--AACGACGT 50592
||||| | | || ||||| ||||| | || ||| | | | | || ||||
Sbjct 37635 TGCGATGATGAATATGAAGGCCAAGGAATTGACCAATTAAAGGATGTCATTGAACGCA-- 37692
Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652
| ||| | || || | ||||| |||||| || ||| ||| ||||||||| || ||
Sbjct 37693 TCAAAGCCAATCCAAATGATCGTCGTATTATATTGAGCGCATGGAATCCAGTGGACATTC 37752
Query 50653 ATCAAACCGTTTTACCTCCGTGTCA-TGTTTTATGTCAATTTTATGCCACAGACAATGTT 50711
|||| | | || || ||||| ||| | | ||||||||||| | | | ||
Sbjct 37753 CACAAATGGCACTTCCACCATGTCACTGTCTCGT-TCAATTTTATGTCGCTAATGGTGAA 37811
Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771
|| ||| |||| || ||||||||||||||||||||| | || ||||||||||| |
Sbjct 37812 TTGAGCTGCCAATTATACCAAAGATCAGCTGATATGGGTCTTGGAGTTCCTTTCAATATT 37871
Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAA 50831
|| || || || ||||| ||||| |||| ||||| | || |||| || || ||
Sbjct 37872 GCATCGTATGCCTTATTGACGTACATGATTGCTCATGTTACAAATTTGAAGCCTGGTGAT 37931
Query 50832 TTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAG 50891
||| ||||||| || || || |||||||||||| ||||| || | || || |||
Sbjct 37932 TTTGTTCATACTTTTGGCGATGCTCATATTTACACGAATCACACTGAGCCATTGAAAGAG 37991
Query 50892 CAATTGACTCGAACG 50906
|| |||||||||
Sbjct 37992 CA----ACTCGAACG 38002
>seq10553
Length=1873
Score = 129 bits (142), Expect = 8e-25
Identities = 268/396 (68%), Gaps = 20/396 (5%)
Strand=Plus/Plus
Query 155745 GATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAATTTTTAGTTTCAACG 155804
|| || || || ||||| || |||||||||||||| || ||| |||| ||||| |
Sbjct 917 GACTGTGCTGCACGTACTAAACCTTCCAATTCAGCACCACTGAAATTCTTAGTGAGAGAT 976
Query 155805 GCTATTT-TATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAGATTTCAT---TTTAGC 155860
|||| || || || || ||||| | | | | | ||| | |||| ||| |
Sbjct 977 GCTAATTCTACACAA-TCAACGTCAGGATTGATTTTCTTGAATTCTCTCATACGTTTTGT 1035
Query 155861 AACGTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTT 155920
| || | ||||||||||| | | || ||||| || || |||||||| ||||
Sbjct 1036 A---TGAATATTTAAAATTTGTACTCTTCCAGGTTCATTAGGCAAGCCAATTTCCATCTG 1092
Query 155921 CAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCAT 155980
| |||||| | ||||||| | || ||||||||||| | ||| ||| || |||||
Sbjct 1093 AACTTCCAATCTACCAGGTCGCATCAAAGCTTCGTCAATCATGTCACGTCGATTTGTCAT 1152
Query 155981 ACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATT 156040
||| |||| |||||||| ||||| ||| |||||||| || |||| ||||||||||||
Sbjct 1153 ACCGATGACCAAAATGTTATTTAATTGTTCAACACCGTCGATCTTAGCCAATAATTGATT 1212
Query 156041 GACTACGGCGTCGTG--CG----------TGGCGTTATCACCGCGTTTTTTACACAGAGC 156088
|| || | || || || || | ||| || |||||| | |||
Sbjct 1213 CACAACCGTATCATGGACGCCAGAATTTCCAGCCACAGAACCTCGAGATTTACAAATAGC 1272
Query 156089 ATCTATTTCATCGAAGACGATAACGTGTAATCCGCT 156124
||| ||||||||||| | ||||| ||| | |||||
Sbjct 1273 ATCGATTTCATCGAATATGATAATGTGGAGACCGCT 1308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 666858192099000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |