Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_000866.4 Length=168903 Score E Sequences producing significant alignments: (Bits) Value seq89 102 9e-17 >seq89 Length=3091062 Score = 102 bits (112), Expect = 9e-17 Identities = 184/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 44546 AATATCAGGATACATCCTTTTGCTTGCGCACTCTAGAGCAAGCTGTTTAATATCATAGTT 44605 ||||||||||||||| ||||| | | |||||||| || | ||||| |||||||| || Sbjct 556795 AATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATT 556736 Query 44606 CGGATCGTCTTTATAAAGATTAACACCTTCTTCAACGAACATAACAAGCTTAGGGAAAAT 44665 |||||| | | || ||| || |||| || || | | ||||| || ||||| || Sbjct 556735 CGGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGAT 556676 Query 44666 AGGAGTTATCCCATCACGACCAAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAAT 44725 | ||| || | ||| ||| | |||||| || | | | || |||||||||| || || Sbjct 556675 GGCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGAT 556616 Query 44726 CATTCGTTCAGTCCAGTCAGTTCCCGTACCAAATGTAATTGTTACAAAAGGAGTCTGTCC 44785 | || | || ||||| |||||| | |||||||||||| || || || Sbjct 556615 TTTACGGCTATATGTATCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTGACC 556556 Query 44786 GTTTGAACTGAATAACGTGTTCACTTCAT 44814 ||||| | | || ||||| | ||||| Sbjct 556555 ATTTGATGTATACAATGTGTTAATTTCAT 556527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540352130162960