Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_000902.1 Length=60942 Score E Sequences producing significant alignments: (Bits) Value seq157 100 1e-16 >seq157 Length=245904 Score = 100 bits (110), Expect = 1e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 12017 AATCTTAAGAAATGGAACAAACAAGTTACAGCAAACTATCACAGCGAGAAATTGATCGCG 12076 ||| |||| ||||||| |||| |||||||||| ||||| | ||||||||||| | Sbjct 39992 AATATTAACAAATGGATAGTACAAACTACAGCAAACCGTCACAACAGGAAATTGATCGTG 40051 Query 12077 CTGAAACTGATTTACTCATCAACCTGTCGACGCTTACCCAGCGCGGTCTGGCAAAGATGA 12136 ||||||| || || ||||||| ||| || | || ||| |||| | || || | Sbjct 40052 CTGAAACGGACTTGCTCATCATCCTTTCCAAACTGACCGGGCGCAAGTTCGCGGAGTTTG 40111 Query 12137 TTGGCTGTCATGAATCGAAGATAAGCAGAACGGACTGGAGATTTATTGCTTCGGTCTTGT 12196 || |||||||||||||| || || | || |||||| | ||||| || | || |||| Sbjct 40112 CCGGGTGTCATGAATCGAAAATCAGTCGCACCGACTGGCGCTTTATCGCCACTGTTTTGT 40171 Query 12197 GTG 12199 ||| Sbjct 40172 GTG 40174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194889555278496