Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_000929.1 Length=36717 Score E Sequences producing significant alignments: (Bits) Value seq157 329 8e-86 >seq157 Length=245904 Score = 329 bits (364), Expect = 8e-86 Identities = 459/638 (72%), Gaps = 9/638 (1%) Strand=Plus/Minus Query 35966 CCAGATTGTTGGCTATGGTTCAAAGGAGCTGCGCGTTGAAACCATATCCTGCTGGCTGGC 36025 |||||||||||| || || ||| | || |||| || |||||||| ||||||||||||| Sbjct 46074 CCAGATTGTTGGATACGGCTCACACGAATTGCGGGTAGAAACCATCGCCTGCTGGCTGGC 46015 Query 36026 CCGCACAATTATTCAGACAAA---GCACTATTCCCGCCGTTTTGTGAATAACTCTTACCT 36082 ||||| ||| | |||| ||| ||| ||| || ||||| ||||| || | || Sbjct 46014 CCGCATCATTGTA---ACAAGTCGGCATTATAGCCGGCGGTTTGTTAATAATTCCTGGCT 45958 Query 36083 TCACCTGGGGGTATTCAGCGGACGCGATCTGGTTGGCGTTCTCCAGTGGGGATATGCCCT 36142 || || ||||||||| ||| | | | |||||||||| | ||||||||||| ||||| Sbjct 45957 ACATCTTGGGGTATTCTCCGGTAGGGCTTTGGTTGGCGTGATGCAGTGGGGATACGCCCT 45898 Query 36143 TAACCCCAACTCAGGTCGTCGTGTCGTGCTTGAAACGGATAACCGGGGCTATATGGAGTT 36202 || || ||| || || || || |||| || || | ||||||||| | Sbjct 45897 GAATCCTAACAGTGGCGCAAAAGTAGTCTCTGGCACGGGGAATCGTGAGTATATGGAGCT 45838 Query 36203 GAACCGCATGTGGCTACACGACGACATGCCCCGCAACTCTGAATCACGGGCCATCAGCTA 36262 |||||| | ||||| || || |||||||| || || || ||||| || |||||||| Sbjct 45837 TAACCGCTTATGGCTGCATGATGACATGCCTAAAAATTCAGAGTCACGAGCGATCAGCTA 45778 Query 36263 CGCGCTGAAAGTTATCAGATTACTGTATCCGTCAG-TGGAGTGGGTTCAGTCCTTTGCAG 36321 || |||||| |||||||||||| ||||| |||| || | ||||| || |||||||||| Sbjct 45777 TGCACTGAAAACTATCAGATTACTTTATCC-TCAGGTGCAATGGGTGCAATCCTTTGCAG 45719 Query 36322 ATGAACGCTGCGGACGCGCAGGCGTTGTGTATCAGGCGTCGAATTTTGATTTTATTGGCA 36381 |||| ||||| || || ||||| |||||||||||| | | ||||| | ||| |||| Sbjct 45718 ATGAGCGCTGTGGGCGTTGTGGCGTGGTGTATCAGGCG-AGTAATTTGAATATATCGGCA 45660 Query 36382 GTCATGAAAGTACGTTCTACGAGCTGGATGGTGAGTGGTATCACGAGATAACGATGAACG 36441 | ||| | ||||| ||||| |||||||||||||||||||| ||| | |||| Sbjct 45659 GCCATTACTCGCGATTCTATGAGCTTGATGGTGAGTGGTATCACGAAATAGCCCGCAACG 45600 Query 36442 CGATTAAGCGAGGTGGACAACGAGGCGTGTATTTACGGGCTAATAAAGAGCGTGCCGTGG 36501 |||| | ||| || || | ||||| | || | |||| |||| ||||||||| | Sbjct 45599 CGATCACGCGGGGCGGCAAGCGAGGAGAATACCTGAGGGCCAATATAGAGCGTGCAACTG 45540 Query 36502 TACACAAATTTAATCAGTATCGCTACATCAGATTCCTGAACAAACGAGCAAGGAAGCGGC 36561 | || || | |||| || || ||| | || || ||||||| || | |||||| | Sbjct 45539 TTCATCGCTTCCAGCAGTTCCGATATATCCGCTTTTTGGACAAACGCGCGAAGAAGCGCC 45480 Query 36562 TAAATACCAAACTATTCAAGGTTCAGCCATACCCTAAG 36599 | ||||| ||| |||| || || ||||| || |||||| Sbjct 45479 TCAATACAAAATTATTTAAAGTGCAGCCTTATCCTAAG 45442 Score = 329 bits (364), Expect = 8e-86 Identities = 459/638 (72%), Gaps = 9/638 (1%) Strand=Plus/Plus Query 35966 CCAGATTGTTGGCTATGGTTCAAAGGAGCTGCGCGTTGAAACCATATCCTGCTGGCTGGC 36025 |||||||||||| || || ||| | || |||| || |||||||| ||||||||||||| Sbjct 48964 CCAGATTGTTGGATACGGCTCACACGAATTGCGGGTAGAAACCATCGCCTGCTGGCTGGC 49023 Query 36026 CCGCACAATTATTCAGACAAA---GCACTATTCCCGCCGTTTTGTGAATAACTCTTACCT 36082 ||||| ||| | |||| ||| ||| ||| || ||||| ||||| || | || Sbjct 49024 CCGCATCATTGTA---ACAAGTCGGCATTATAGCCGGCGGTTTGTTAATAATTCCTGGCT 49080 Query 36083 TCACCTGGGGGTATTCAGCGGACGCGATCTGGTTGGCGTTCTCCAGTGGGGATATGCCCT 36142 || || ||||||||| ||| | | | |||||||||| | ||||||||||| ||||| Sbjct 49081 ACATCTTGGGGTATTCTCCGGTAGGGCTTTGGTTGGCGTGATGCAGTGGGGATACGCCCT 49140 Query 36143 TAACCCCAACTCAGGTCGTCGTGTCGTGCTTGAAACGGATAACCGGGGCTATATGGAGTT 36202 || || ||| || || || || |||| || || | ||||||||| | Sbjct 49141 GAATCCTAACAGTGGCGCAAAAGTAGTCTCTGGCACGGGGAATCGTGAGTATATGGAGCT 49200 Query 36203 GAACCGCATGTGGCTACACGACGACATGCCCCGCAACTCTGAATCACGGGCCATCAGCTA 36262 |||||| | ||||| || || |||||||| || || || ||||| || |||||||| Sbjct 49201 TAACCGCTTATGGCTGCATGATGACATGCCTAAAAATTCAGAGTCACGAGCGATCAGCTA 49260 Query 36263 CGCGCTGAAAGTTATCAGATTACTGTATCCGTCA-GTGGAGTGGGTTCAGTCCTTTGCAG 36321 || |||||| |||||||||||| ||||| ||| ||| | ||||| || |||||||||| Sbjct 49261 TGCACTGAAAACTATCAGATTACTTTATCC-TCAGGTGCAATGGGTGCAATCCTTTGCAG 49319 Query 36322 ATGAACGCTGCGGACGCGCAGGCGTTGTGTATCAGGCGTCGAATTTTGATTTTATTGGCA 36381 |||| ||||| || || ||||| |||||||||||| | | ||||| | ||| |||| Sbjct 49320 ATGAGCGCTGTGGGCGTTGTGGCGTGGTGTATCAGGCG-AGTAATTTGAATATATCGGCA 49378 Query 36382 GTCATGAAAGTACGTTCTACGAGCTGGATGGTGAGTGGTATCACGAGATAACGATGAACG 36441 | ||| | ||||| ||||| |||||||||||||||||||| ||| | |||| Sbjct 49379 GCCATTACTCGCGATTCTATGAGCTTGATGGTGAGTGGTATCACGAAATAGCCCGCAACG 49438 Query 36442 CGATTAAGCGAGGTGGACAACGAGGCGTGTATTTACGGGCTAATAAAGAGCGTGCCGTGG 36501 |||| | ||| || || | ||||| | || | |||| |||| ||||||||| | Sbjct 49439 CGATCACGCGGGGCGGCAAGCGAGGAGAATACCTGAGGGCCAATATAGAGCGTGCAACTG 49498 Query 36502 TACACAAATTTAATCAGTATCGCTACATCAGATTCCTGAACAAACGAGCAAGGAAGCGGC 36561 | || || | |||| || || ||| | || || ||||||| || | |||||| | Sbjct 49499 TTCATCGCTTCCAGCAGTTCCGATATATCCGCTTTTTGGACAAACGCGCGAAGAAGCGCC 49558 Query 36562 TAAATACCAAACTATTCAAGGTTCAGCCATACCCTAAG 36599 | ||||| ||| |||| || || ||||| || |||||| Sbjct 49559 TCAATACAAAATTATTTAAAGTGCAGCCTTATCCTAAG 49596 Score = 185 bits (204), Expect = 2e-42 Identities = 279/393 (71%), Gaps = 8/393 (2%) Strand=Plus/Plus Query 35097 GATTGGCTATGTAAGGGTATCAACAAATGACCAGAATACAGACCTGCAACGAAACGCTCT 35156 ||| |||||| | ||||| |||| ||||||||| || || || | || | ||| | || Sbjct 192203 GATAGGCTATATGAGGGTGTCAAAAAATGACCAAAACACCGATTTACAGCAAAAATC-CT 192261 Query 35157 TG-TTTGTGCAGGATGTGAACAAATATTTGAAGATAAATTAAGCGGAACAAGGACAGACC 35215 || |||| ||| ||||| ||||| ||||| |||||| | || |||| || |||||| Sbjct 192262 TGATTTGCGCAAATTGTGAGCAAATTTTTGAGGATAAAATCAGTGGAAAAA---CAGACC 192318 Query 35216 ---GACCGGGATTAAAACGCGCTTTAAAGCGCCTTCAAAAAGGTGACACACTGGTTGTCT 35272 |||| |||||||||||||| ||||| |||| || || || |||||||| |||| Sbjct 192319 AGAGACCCGGATTAAAACGCGCGTTAAACTGCCTGAAATCGGGCGATACACTGGTGGTCT 192378 Query 35273 GGAAACTGGATCGCCTCGGGCGAAGCATGAAACATTTGATTTCTCTCGTAGGGGAATTAC 35332 |||| || ||| | || || |||||||| |||||||||||| || | || || | Sbjct 192379 GGAAGCTCGATAGGCTGGGTCGAAGCATTAAACATTTGATTACTTTAATATCCAAACTGG 192438 Query 35333 GAGAGCGAGGGATTAATTTTCGCAGTCTTACTGACAGTATTGATACGTCATCTCCAATGG 35392 ||| ||| || |||||| || | || || | |||||||| || | | | Sbjct 192439 AAGATGAAGGCATCCATTTTCATAGCTTGACGGATACCATTGATACCTCTACGTCCGCAG 192498 Query 35393 GGCGTTTTTTCTTCCACGTTATGGGTGCCCTGGCTGAAATGGAACGAGAACTAATTATCG 35452 | |||||||||||||| || ||| | || |||| ||||||| || ||||| ||| | | Sbjct 192499 GCCGTTTTTTCTTCCATGTGATGAGCGCGTTGGCACAAATGGAGCGGGAACTCATTGTTG 192558 Query 35453 AGCGAACGATGGCTGGACTTGCTGCCGCCAGAA 35485 |||| || ||| || | || || || |||| Sbjct 192559 AGCGTACTCAGGCAGGTTTAGCCGCAGCAAGAA 192591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117370845889596