Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq74 84.2 2e-11 >seq74 Length=3691182 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 119014 CCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTTATCGTTTAAGTAGATACAG 119073 || ||| |||| || || || | || ||||| |||||| ||||| ||||| | | Sbjct 1881709 CCAACGAATCCATTTGGGTCCCTCCCATCTAAGCTGTACTTGTCGTTCAAGTAAAGAGCA 1881650 Query 119074 ACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACATA 119133 || || | ||| ||| ||| ||| ||||||| ||||||||||| ||||| ||||| Sbjct 1881649 ACTCTCAGAGCATCTTCAGGACTCTGGGTCCATTCGAGTATTTTTTTCGCCCAATACATC 1881590 Query 119134 CGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATAGA 119193 | | | ||||||||||| || || || | | ||| | || || | ||||||||| Sbjct 1881589 CTCAGGAAACCGTGCATTTTTCCTTCAGTATTTAACTGGATCTGAGCCGAATTCCATAGA 1881530 Query 119194 GGATCGTGTGT 119204 ||| || || Sbjct 1881529 TCATCATGCGT 1881519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511405437462640