Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_001609.1 Length=11624 Score E Sequences producing significant alignments: (Bits) Value seq157 93.3 3e-15 >seq157 Length=245904 Score = 93.3 bits (102), Expect = 3e-15 Identities = 164/238 (69%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 2723 CCCACCACTGCATCATTAAACGCCGCTCATCCAAATGCTCGGAGGTATGGATATATGCCG 2782 |||||||||||| ||| || | | ||| | | || ||| | |||| ||||| |||| Sbjct 75525 CCCACCACTGCAACATCAACCTTCACTCTCCGAGATTCTCAGCCTTATGAATATAAGCCG 75466 Query 2783 CACGTACATTATTACGCTCTGAGTGGCTCAGTTGCCTCTCTATCGCGTCATCACTC---C 2839 | | | | |||| ||| ||||||| || | ||| | ||| ||| ||| | Sbjct 75465 CCCTCATAGAGCTACGTTCTTGATGGCTCATCTGTCACTCCACCGC---ATCCCTCGACC 75409 Query 2840 ATAACCCCGACTCCCCCAACGCACCACGCGCCATAGTCCTAAACCCATGCCCACACACCT 2899 | || ||||| || ||| || || | |||| |||| || ||||| ||||| || | Sbjct 75408 ACAATCCCGATTCAATCAAAAAACTACACTCCATTGTCCCGAAACCATGTCCACATACTT 75349 Query 2900 CGGTTTTAGTATCATAGCCCATCGCACGCAATGCGCTGTTTACCGTGTTTTCACTCAT 2957 | |||| |||||||||| |||| | || || || | || |||||||||||||| || Sbjct 75348 CCATTTTCGTATCATAGCTCATCACTCGTAAAGCTTTATTCACCGTGTTTTCACTAAT 75291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37081015130464