Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq46 131 1e-25 >seq46 Length=4728336 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || |||||| |||| ||||||||| || ||||||||||||||||| || | Sbjct 1481057 CCTCCTCTCAACCTGAGAACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTGAG 1481116 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| || ||||| || ||| |||| || ||||||||||| ||| Sbjct 1481117 AGCGTACGCCCATCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGGA 1481176 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||| ||||| || || ||| || | | | ||| || ||||| | Sbjct 1481177 ATGCCTTCTTTGTCTTGTATTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCGACT 1481236 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||| ||||||| ||||| ||||| |||||||| Sbjct 1481237 TCTAAAGTTATGGTCTTTCCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || | ||| |||| |||| ||| || ||||||||||||||||| |||| Sbjct 1481741 CCACCTCTGAGACGGAGGACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCCGAG 1481800 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | ||||| || || ||||| || |||| || || || ||||| || Sbjct 1481801 AGAGTTCTACCATCCTCAAGTTGCTTGCCAGCGAAAATCAGCCTTTGTTGGTCTGGCGGG 1481860 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| ||| || ||||| | | | ||||| ||||| | Sbjct 1481861 ATACCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCAATTGTATCTGAAGGCTCAACT 1481920 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| || ||||| || ||||| || ||||| ||||| || |||||| Sbjct 1481921 TCCAATGTGATGGTTTTTCCGGTCAAAGTTTTCACAAAGATCTGCATT 1481968 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || || ||||||||||||||||| | |||||| | | || || |||||||| || Sbjct 1481543 GTTGATTCTTTTTGAATGTTATAGTCAGAAAGGGTTCGACCATCTTCAAGCTGTTTTCCA 1481602 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || |||| | |||||||| || ||| | ||||| || || ||||||| || Sbjct 1481603 GCGAAAATCAACCTCTGCTGATCTGGGGGGATTCCTTCTTTATCTTGGATCTTTGCCTTG 1481662 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | ||| || ||||| ||| | ||||| |||||||||||||| || Sbjct 1481663 ACATTTTCAATAGTGTCGGAAGGCTCTACTTCAAGTGTAATAGTCTTGCCGGTTAAAGTC 1481722 Query 21159 TTGACAAATATTTGCAT 21175 || || || || ||||| Sbjct 1481723 TTTACGAAGATCTGCAT 1481739 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||||| | || | ||| | |||||| || || || ||||| || |||| Sbjct 1480145 CCGCCTCTGAGCCTCAAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCCGAA 1480204 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | |||| |||| || || || ||| |||| | ||||||||||| || Sbjct 1480205 AGTGTGCGTCCGTCTTCCAATTGCTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGAGGG 1480264 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||| || ||||| ||| || | | | || ||| ||||| | Sbjct 1480265 ATCCCTTCCTTATCCTGAATCTTAGCTTTGACATTATCAATGGTGTCAGATGGCTCGACT 1480324 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| || ||||| ||||| ||||| |||||||| Sbjct 1480325 TCGAGGGTGATTGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480371 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||||| ||||||| || | || || || ||||| ||||| ||||| | Sbjct 1570483 CCTCCTCTAAGCCTAAGCACCAAGTGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGAA 1570424 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| ||||| || || ||| | || | |||||||||||| ||| Sbjct 1570423 AGAGTACGTCCATCCTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGA 1570364 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | | | ||||| || || | Sbjct 1570363 ATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTCTCAATGGTATCGGATGGTTCAACT 1570304 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| |||||||| || || | || || || || || ||||| Sbjct 1570303 TCCAAGGTGATGGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 1570257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422251984909832