Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_001884.1 Length=134416 Score E Sequences producing significant alignments: (Bits) Value seq89 96.9 3e-15 >seq89 Length=3091062 Score = 96.9 bits (106), Expect = 3e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 123632 ATGAACCTCCATGGATTTCTAGCTCAAAATAATATTGCTTATGAAAGTGAAGAAGCTAAG 123691 ||||| || ||||| | ||||| ||||||| |||| ||||||| ||||||||| || Sbjct 2802605 ATGAATCTACATGGCTACTTAGCTAAAAATAAAATTGGTTATGAATCTGAAGAAGCGAAA 2802546 Query 123692 GATTTTGCAAATACATACTTTATGATGGTTAACTTCTACTCACTGCAGCGTTCTATGGAA 123751 ||||| ||||| | | |||||||||| | |||| || || | | ||||| |||||| Sbjct 2802545 GATTTCGCAAACATTTTCTTTATGATGATGAACTATTATTCCATTGAACGTTCAATGGAA 2802486 Query 123752 ATTGCACGAGAAA 123764 ||||| ||||| Sbjct 2802485 ATTGCTAAAGAAA 2802473 Score = 91.5 bits (100), Expect = 1e-13 Identities = 116/158 (73%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 60843 TTTGACTGCGTCTTTAAGTGCTTTTGCTGGCTTAAATGCAGGTGCTTTTGTAGCCGGAAT 60902 ||| ||||||||||| | ||||| | | |||||||| || |||| | || || || Sbjct 1967996 TTTTACTGCGTCTTTTAAAGCTTTACCAGCTTTAAATGCTGGAACTTTGCTTGCAGGGAT 1967937 Query 60903 ATCAATTTCCTCTCCTGTCTGGGGATTTCTCCCTTTACGAGCTGCGCGTTCACGAACTTC 60962 ||||||||| | || || || || || | ||||||||||| |||||||| || ||||| Sbjct 1967936 ATCAATTTCTTTACCAGTTTGAGGGTTACGGCCTTTACGAGCAGCGCGTTCGCGTACTTC 1967877 Query 60963 AAATGTTCCGAAACCAGGAATACT--TACTTTTTCTCC 60998 || | ||||| ||| | || | ||||||||| || Sbjct 1967876 GAAGTTACCGAATCCA--ATTAATTGTACTTTTTCACC 1967841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429999052534394