Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq46 120 2e-22 >seq46 Length=4728336 Score = 120 bits (132), Expect = 2e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| |||| || ||||| ||||||||||| || |||| || || || Sbjct 1480143 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAAACCATCACTCTCGAAGTCGAGCCATCA 1480084 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | || ||||| ||||||||||| | ||| |||||| Sbjct 1480083 GATACCATTGAAAACGTAAAAGCCAAAATCCAAGATAAAGAAGGAATTCCCCCAGATCAG 1480024 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 ||||| || |||||||| ||||| ||| |||||||| || | ||| | ||||||||| Sbjct 1480023 CAAAGGCTCATCTTTGCCGGCAAGCAACTGGAAGATGGTCGTACACTCT--CCGATTACA 1479966 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||||| || ||||||||||| ||| | || | || | |||||||| Sbjct 1479965 ATATTCAGAAAGAATCTACTCTCCACCTCGTACTGAGACTCCGAGGAGG 1479917 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||||||| | || || ||||| ||||||||||| || || ||||| | Sbjct 1481055 ATGCAAATATTCGTAAAGACTTTGACAGGCAAAACCATCACTCTTGAGGTCGAACCATCC 1480996 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| || ||| ||||||||||| | || ||||||| Sbjct 1480995 GACACAATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAAGGCATCCCACCAGATCAA 1480936 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || || | ||||| || || ||||| ||||||||| ||| | | || |||||| Sbjct 1480935 CAGAGGTTAATCTTCGCTGGAAAACAGTTGGAAGATGGACGCACTCTTTCGGACTACAAT 1480876 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 |||||||| ||||| || |||||| | || || Sbjct 1480875 ATTCAAAAAGAATCCACCCTTCACCTCGTTTT 1480844 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || | ||||| || || || ||||| ||||| ||| ||||| | Sbjct 1463883 AATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACAATTACTTTGGAAGTAGAACCATC 1463824 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | || || || |||||||||||| | || |||||| Sbjct 1463823 TGACACAATTGAAAATGTGAAAGCTAAGATCCAGGATAAAGAAGGTATTCCTCCAGATCA 1463764 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||||| ||||||||||| || |||||| | |||||| |||| | |||| ||||| Sbjct 1463763 GCAAAGGCTTATCTTTGCCGGTAAACAACTTGAAGATGGTCGAACTCTTTCCGACTACAA 1463704 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 ||||| || ||||| || |||||| | || || Sbjct 1463703 CATTCAGAAAGAATCGACACTTCACCTTGTCTT 1463671 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090 || |||||| || || | ||||| ||||| || |||||||| || ||| || || Sbjct 1481971 AACAATGCAGATCTTTGTGAAAACTTTGACCGGAAAAACCATCACATTGGAAGTTGAGCC 1481912 Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150 |||| || | | || | ||| ||||| || ||||||||| | || ||| Sbjct 1481911 TTCAGATACAATTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAAGGTATCCCGCCAGA 1481852 Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210 |||||||| || || || || ||||| ||| | || ||| | |||| | | ||||| Sbjct 1481851 CCAACAAAGGCTGATTTTCGCTGGCAAGCAACTTGAGGATGGTAGAACTCTCTCGGATTA 1481792 Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGT 25243 || |||||||||||||| ||||| ||| |||| Sbjct 1481791 TAACATTCAAAAGGAATCGACTCTGCACTTGGT 1481759 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || | |||||||| || || ||||| || ||| ||| ||||| | Sbjct 1480600 AATGCAAATCTTTGTGAAAACATTAACAGGGAAAACAATCACCTTGGAAGTCGAACCTTC 1480541 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | | | || |||||| || ||||||||| | || |||||| Sbjct 1480540 TGATACAATTGAAAACGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCTCCAGATCA 1480481 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTAC 25211 || ||| | || ||||| ||||||||| | |||||| || | | ||| | |||||| Sbjct 1480480 GCAGAGATTGATTTTTGCCGGCAAACAACTTGAAGATGGTCGTACATTAT--CAGATTAC 1480423 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| ||||| ||||| || || ||| | || ||| | | ||||||| Sbjct 1480422 AATATCCAAAAAGAATCCACACTCCACCTTGTTTTAAGGCTCAGAGGAGG 1480373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410789780766428