Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq3 141 6e-29 >seq3 Length=17889087 Score = 141 bits (156), Expect = 6e-29 Identities = 237/340 (70%), Gaps = 2/340 (1%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 || ||||| || ||||| | ||||| |||| |||||| ||||||||||| || || ||| Sbjct 15712273 GTAACATGAGCAATCATGTATGTTAAAAGAGCATAGCTTGCAATGTTAAATGGAACTCCT 15712214 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 | ||||| || || ||||| ||||| | ||| || || | | |||| |||||| Sbjct 15712213 AAGCCCATGTCTGCCGATCTCTGATACAGCTGGCAAGATAATTCGCCATTTGCAACATAA 15712154 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 || || ||| ||| || ||||| | ||||| || | || | |||||| Sbjct 15712153 AATTGTACCAAACAATGGCAAGGGGGTAGAGCCATCTTGTCTAAATGCATAGGATTCCAG 15712094 Query 97297 GCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTT 97356 || ||||| | ||| |||| || | || || || | || || || |||| | || Sbjct 15712093 GCGCACATAATCATCCTTCGGTCATTGGGATTGGTTTTAATAGTGTTTATTACAGCCATT 15712034 Query 97357 AATTGATCAACGCCTTCTCCACCATAAT-TGTGCTTAAGACCTTGATATTCTGCTCCAAA 97415 ||||| || || |||| ||| |||| |||| | | ||| ||| || ||||| || Sbjct 15712033 AATTGGTCGACACCTTGTCCTGTGTAATCTGTG-TGCATGTCTTTATAATCGGCTCCGAA 15711975 Query 97416 ATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 ||||||||| || |||||||||||||| ||||| || ||| Sbjct 15711974 ATGCCTCCACTGAAATCCATAAACAGGCCCAAGATCCCCT 15711935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346778074545140