Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value seq157 89.7 1e-13 >seq157 Length=245904 Score = 89.7 bits (98), Expect = 1e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 29378 GGAAAATTAACAAAT-GACACAAGCAAGTTACAGCAAGCCAACACAGCGAGAAATTGATC 29436 |||| |||||||||| || | | ||| |||||||| || |||| | |||||||||| Sbjct 39990 GGAATATTAACAAATGGATAGTA-CAAACTACAGCAAACCGTCACAACAGGAAATTGATC 40048 Query 29437 GCGCAGAAACAGATTTACTCATCAACCTGTCAACGCTTACCCAGCGCGGTCTGGCAAAGA 29496 | || ||||| || || ||||||| ||| || | || ||| |||| | || || Sbjct 40049 GTGCTGAAACGGACTTGCTCATCATCCTTTCCAAACTGACCGGGCGCAAGTTCGCGGAGT 40108 Query 29497 TGATTGGCTGTCATGAATCGAAGATAAGCAGAACGGACTGGAGATTTATTGCTTCGGTCT 29556 | || |||||||||||||| || || | || |||||| | ||||| || | || | Sbjct 40109 TTGCCGGGTGTCATGAATCGAAAATCAGTCGCACCGACTGGCGCTTTATCGCCACTGTTT 40168 Query 29557 TGTGTG 29562 |||||| Sbjct 40169 TGTGTG 40174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127018685262456