Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq14 114 1e-20 seq121 111 2e-19 seq1 111 2e-19 seq91 109 6e-19 seq20 109 6e-19 seq45 107 2e-18 seq5 107 2e-18 seq104 105 8e-18 seq6 104 3e-17 seq23 96.9 4e-15 seq7 95.1 1e-14 seq46 82.4 9e-11 >seq14 Length=11141052 Score = 114 bits (126), Expect = 1e-20 Identities = 74/81 (91%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 9307110 AAAAAATTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 9307169 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 9307170 TGACCACTATACTACCGAGGA 9307190 >seq121 Length=982330 Score = 111 bits (122), Expect = 2e-19 Identities = 88/103 (85%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 60036 AACAACAAATTAACGTTTATGAAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCT 60094 ||||| || ||| |||| ||||||| || ||| |||| ||||||||||||| ||||| Sbjct 460229 AACAA-AAGTTAGAATTTAAAAAAAATTATCCTCCCCGGCGGGGAATCGAACCCCGGTCT 460171 Query 60095 CCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 60137 |||||||||||||||| ||||| ||||||||||||||||||| Sbjct 460170 CCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGA 460128 >seq1 Length=33720124 Score = 111 bits (122), Expect = 2e-19 Identities = 75/83 (90%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 60057 AAAAATT--TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 ||||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| || Sbjct 28770806 AAAAATTAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 28770865 Query 60115 ACTCACCACTATACTACCGAGGA 60137 ||| ||||||||||||||||||| Sbjct 28770866 ACTGACCACTATACTACCGAGGA 28770888 Score = 105 bits (116), Expect = 8e-18 Identities = 77/87 (89%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 28866700 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 28866759 Query 60126 TACTACCGAGGA-TTGAATATATAACT 60151 |||||||||||| ||| || || |||| Sbjct 28866760 TACTACCGAGGACTTGTAT-TAAAACT 28866785 Score = 104 bits (114), Expect = 3e-17 Identities = 73/82 (89%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 ||||||| | ||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 28592640 AAAAATTAACCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 28592699 Query 60116 CTCACCACTATACTACCGAGGA 60137 || ||||||||||||||||||| Sbjct 28592700 CTGACCACTATACTACCGAGGA 28592721 >seq91 Length=2340937 Score = 109 bits (120), Expect = 6e-19 Identities = 74/82 (90%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 60057 AAAAATT-TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 1004985 AAAAATAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 1005044 Query 60116 CTCACCACTATACTACCGAGGA 60137 || ||||||||||||||||||| Sbjct 1005045 CTGACCACTATACTACCGAGGA 1005066 >seq20 Length=9936027 Score = 109 bits (120), Expect = 6e-19 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 ||||||| | ||| |||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct 6525635 AAAAATTAACCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 6525576 Query 60116 CTCACCACTATACTACCGAGGATTG 60140 || |||||||||||||||||||||| Sbjct 6525575 CTGACCACTATACTACCGAGGATTG 6525551 >seq45 Length=4842313 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||||| | ||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 639036 AAAAATTACCCCCTCGGCAGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGATTAC 638977 Query 60117 TCACCACTATACTACCGAGGAT 60138 | ||||||||||||| |||||| Sbjct 638976 TTACCACTATACTACTGAGGAT 638955 >seq5 Length=17325453 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 1984265 AAAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1984206 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||||||| Sbjct 1984205 TGACCACTATACTACCGAGGAT 1984184 >seq104 Length=1475941 Score = 105 bits (116), Expect = 8e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 1091989 AAAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1092048 Query 60117 TCACCACTATACTACCGAGGA 60137 | ||||||||||||||||||| Sbjct 1092049 TGACCACTATACTACCGAGGA 1092069 >seq6 Length=15957911 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 4167906 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 4167847 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 4167846 TACTACCGAGGA 4167835 Score = 84.2 bits (92), Expect = 3e-11 Identities = 62/72 (86%), Gaps = 4/72 (6%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||| |||||||| ||||| ||||||| Sbjct 4542950 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCG----ACAGGCGGGGATACTGACCACTA 4542895 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 4542894 TACTACCGAGGA 4542883 >seq23 Length=8445320 Score = 96.9 bits (106), Expect = 4e-15 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 60067 TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTAT 60126 ||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct 7779881 TCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTAT 7779822 Query 60127 ACTACCGAGGA 60137 ||||| ||||| Sbjct 7779821 ACTACTGAGGA 7779811 >seq7 Length=14356694 Score = 95.1 bits (104), Expect = 1e-14 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135 ||||||||||||| ||||||||||||||||||| | ||||| ||||||||||||||||| Sbjct 2911530 GGGAATCGAACCCCGGTCTCCCGCGTGACAGGCTGGGATACTGACCACTATACTACCGAG 2911471 Query 60136 GATTG 60140 ||||| Sbjct 2911470 GATTG 2911466 >seq46 Length=4728336 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 || || || || || ||||||| ||||| ||| | || |||| ||||||||| || || Sbjct 1480637 TCTTTCTGGATGTTATAATCAGAAAGAGTGCGCCCATCTTCTAACTGCTTACCGGCAAAG 1480696 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||| | ||||||||| | || | | || || ||| ||| |||| | ||||| | Sbjct 1480697 ATGAGCCTCTGCTGGTCTGGTGGGATACCTTCTTTATCC-TGAATTTTCGCTTTGACATT 1480755 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||| || | ||| || || | ||||| || || || |||| || || || Sbjct 1480756 TTCAATCGTATCCGATGGTTCGACTTCAAGAGTGATCGTCTTTCCTGTTAAAGTTTTCAC 1480815 Query 43172 AAAGATTTGCAT 43183 |||||||||||| Sbjct 1480816 AAAGATTTGCAT 1480827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571807578896560