Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01]
1,402 sequences; 650,477,627 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq46 118 2e-21
>seq46
Length=4728336
Score = 118 bits (130), Expect = 2e-21
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| ||||| || ||||| || | || | || |||||||| ||||| ||||||||
Sbjct 1480373 CCTCCTCTGAGCCTTAAAACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAATCTGAT 1480432
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| || | | ||| || | |||||| || |||||||||||||| |||||||| |||||
Sbjct 1480433 AATGTACGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAATCTCTGCTGATCTGGAGGG 1480492
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||| ||||| ||||| ||| ||| |||
Sbjct 1480493 ATACCTTCTTTGTCTTGAATTTTAGCTTTTACGTTTTCAATTGTATCAGAAGGTTCGACT 1480552
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|| | ||||||||||| |||||||||||||| | || |||||||||
Sbjct 1480553 TCCAAGGTGATTGTTTTCCCTGTTAATGTTTTCACAAAGATTTGCATT 1480600
Score = 113 bits (124), Expect = 7e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| | ||| ||||| | ||| | ||||||||||| || |||||||| |||
Sbjct 1481285 CCTCCTCGCAATCTCAATACAAGATGGAGGGTAGATTCTTTCTGAATGTTATAATCGGAA 1481344
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| |||| || || || | ||| ||||| ||||||||||| || |||||||| ||||||
Sbjct 1481345 AGTGTTCGGCCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGA 1481404
Query 146171 ATTCCTTCTTTATCTTG 146187
|| || |||||||||||
Sbjct 1481405 ATACCCTCTTTATCTTG 1481421
Score = 107 bits (118), Expect = 3e-18
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||||||||| || || || || | || | || |||||||| || || || || |
Sbjct 1463654 TTCCACCTCTGAGCCTCAAGACAAGGTGAAGTGTCGATTCTTTCTGAATGTTGTAGTCGG 1463713
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
||||||||| | ||| || | |||||| || ||||| || | ||||||||||| ||||
Sbjct 1463714 AAAGAGTTCGACCATCTTCAAGTTGTTTACCGGCAAAGATAAGCCTTTGCTGATCTGGAG 1463773
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
|||| ||||||||||| || || || || |||||
Sbjct 1463774 GAATACCTTCTTTATCCTGGATCTTAGCTTTCACATTTTCAATTGTGTCAGATGGTTCTA 1463833
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|||| | || ||||||||||| ||||| ||||||| || |||||||||
Sbjct 1463834 CTTCCAAAGTAATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCATT 1463883
Score = 102 bits (112), Expect = 1e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|| ||||| | || | |||||||| ||||| ||||| ||| || || |||||||||||
Sbjct 1481057 CCTCCTCTCAACCTGAGAACCAAATGCAAAGTCGATTCCTTTTGA-ATGTTATAATCTGA 1481115
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
|| || | | ||| || | ||||||||| |||||||||| || ||||| || || ||
Sbjct 1481116 GAGCGTACGCCCATCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGG 1481175
Query 146170 AATTCCTTCTTTATCTTG 146187
||| |||||||| |||||
Sbjct 1481176 AATGCCTTCTTTGTCTTG 1481193
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| ||||| | ||| || || | || | || |||||||| || ||||| || |||
Sbjct 1481513 CCTCCTCTCAATCTCAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCAGAA 1481572
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| |||| | ||| || | ||||||||||| |||||||| || |||||||| || ||
Sbjct 1481573 AGGGTTCGACCATCTTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGGGGG 1481632
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||||||||||||
Sbjct 1481633 ATTCCTTCTTTATCTTG 1481649
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||| ||||| | ||| | || | |||||||||||| ||||| ||||| ||
Sbjct 1479917 CCTCCTCGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCGGAG 1479976
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | | ||| || | ||| || || ||||| || | ||||||||||| || |||
Sbjct 1479977 AGTGTACGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGATCTGGGGGA 1480036
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||||||||||||
Sbjct 1480037 ATTCCTTCTTTATCTTG 1480053
Score = 89.7 bits (98), Expect = 8e-13
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| ||||| || || || || | ||| | || |||||||| || |||||||| |
Sbjct 1463882 TTCCGCCTCTGAGCCTCAAGACAAGATGAAGTGTTGATTCTTTCTGAATGTTATAATCCG 1463941
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
||||||| | | ||| || || |||||||| || || || || || || ||||| || |
Sbjct 1463942 AAAGAGTGCGTCCATCTTCCAACTGTTTTCCGGCGAAGATTAACCTCTGTTGATCTGGTG 1464001
Query 146169 GAATTCCTTCTTTATCTTG 146187
| || ||||||||||| ||
Sbjct 1464002 GGATGCCTTCTTTATCCTG 1464020
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| ||||| || || || || | ||| | ||| |||||||| || || ||||| |||
Sbjct 1480145 CCGCCTCTGAGCCTCAAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCCGAA 1480204
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | | || || ||||| |||||||||||||| || || ||||| || |||||
Sbjct 1480205 AGTGTGCGTCCGTCTTCCAATTGCTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGAGGG 1480264
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| ||||| ||
Sbjct 1480265 ATCCCTTCCTTATCCTG 1480281
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||||||| || | ||||| || | || |||||||| || || || || |||
Sbjct 1570483 CCTCCTCTAAGCCTAAGCACCAAGTGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGAA 1570424
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||| | | ||| || | || ||||| ||||| |||||||| ||||| || || |||
Sbjct 1570423 AGAGTACGTCCATCCTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGA 1570364
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| || |||||
Sbjct 1570363 ATTCCTTCCTTGTCTTG 1570347
Score = 87.8 bits (96), Expect = 3e-12
Identities = 152/229 (66%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| | || |||| || | ||| | ||| |||||||| || |||||||| |
Sbjct 1480599 TTCCACCACGGAGCCTTAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTATAATCAG 1480658
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
||||||| | | ||| ||||| || || || ||||| || | || ||||| || || |
Sbjct 1480659 AAAGAGTGCGCCCATCTTCTAACTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTG 1480718
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
| || ||||||||||| || ||||| || ||| |
Sbjct 1480719 GGATACCTTCTTTATCCTGAATTTTCGCTTTGACATTTTCAATCGTATCCGATGGTTCGA 1480778
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| || ||||| || || |||||||| ||||| | || ||||||||
Sbjct 1480779 CTTCAAGAGTGATCGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743513369699840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |