Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq13 86.0 6e-12 >seq13 Length=9188118 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 || |||||||| ||||| | ||||||||| ||||| ||||| || ||||| |||||| Sbjct 3474719 ATGTAAGTATCGATTAGAAGTGAATACATTTCGGAATGGATATTTTCTATTGCGATCTGA 3474778 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTC-AGAGTAAAACCTTTCTGCTAA 16623 ||||| || || || || ||||| | | ||| ||||| ||| |||||| ||| | | Sbjct 3474779 AAACCGTAGAAACACCTCGCTTCAGTCACTTGGACTTCTTGAG-AAAACCGTTCGACAAG 3474837 Query 16624 GTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGC 16662 ||||| || || || || || || || ||||| || Sbjct 3474838 ATTTTCATTTACAATCCCGTCCGATGCAGCGAAAAATGC 3474876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462503894477200