Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq89 123 2e-24 >seq89 Length=3091062 Score = 123 bits (136), Expect = 2e-24 Identities = 141/186 (76%), Gaps = 10/186 (5%) Strand=Plus/Plus Query 14518 TTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATC--AC 14575 ||||| | | || |||||||||||||||||||| || ||||||||||| |||||| | Sbjct 2047516 TTATGAAACAAGGTACAGTAAAATGGTTTAACGCTGAAAAAGGATTTGGTTTTATCGAAG 2047575 Query 14576 TTCAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAAT---CCAATCTGATGGATT 14632 || |||| || || || | |||| |||||||||||||| |||| || || | Sbjct 2047576 TT--GAAGGAGAAAACGACGTATTCGTACACTTCTCAGCAATTAACCAA---GAAGGTTA 2047630 Query 14633 CAAATCACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCT 14692 ||||||| | || ||||||||| |||||||||||| || | ||||| | || |||| Sbjct 2047631 CAAATCATTAGAAGAAGGTCAATCAGTTGAATTTGAAGTAGTTGAAGGCGACCGCGGTCC 2047690 Query 14693 TCAAGC 14698 |||||| Sbjct 2047691 TCAAGC 2047696 Score = 93.3 bits (102), Expect = 4e-15 Identities = 136/189 (72%), Gaps = 10/189 (5%) Strand=Plus/Minus Query 14517 ATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATC--A 14574 |||||| || || ||||| ||||||||||| ||||| ||||| || || || ||| | Sbjct 71733 ATTATGAATAACGGTACAGTTAAATGGTTTAATGCAGAAAAAGGTTTCGGTTTCATCGAA 71674 Query 14575 CTTCAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATC---CAATCTGATGGAT 14631 || |||| || || || | |||| ||||||||||||||| ||| || || | Sbjct 71673 GTT--GAAGGTGGAAACGACGTATTCGTACACTTCTCAGCAATCGCTCAA---GAAGGTT 71619 Query 14632 TCAAATCACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTC 14691 ||||||| | || ||||| ||| |||||||| || | | ||||| | || |||| Sbjct 71618 ACAAATCATTAGAAGAAGGACAAGCTGTTGAATTCGAAATCGTTGAAGGCGACCGCGGTC 71559 Query 14692 TTCAAGCAG 14700 |||||||| Sbjct 71558 CTCAAGCAG 71550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48453614523892