Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq3 183 2e-41 >seq3 Length=17889087 Score = 183 bits (202), Expect = 2e-41 Identities = 251/349 (72%), Gaps = 14/349 (4%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 |||||| | || ||||| ||||||||||| ||||| ||||| ||||| || ||| ||| Sbjct 15711936 GGGGATCTTGGGCCTGTTTATGGATTTCAGTGGAGGCATTTCGGAGCCGATTATAAAGAC 15711995 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 ||| ||||| |||| |||||||| || || |||||| ||| || || ||| Sbjct 15711996 ATGCACACAGATTACACAGGACAAGGTGTCGACCAATTAATGGCTGTAATAAACACTATT 15712055 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 ||||| || || || ||| |||| || ||| | ||||||||||| ||| ||| | Sbjct 15712056 AAAACCAATCCCAATGACCGAAGGATGATTATGTGCGCCTGGAATCCTA------TGCAT 15712109 Query 20398 TTA------ATGGCTTTGCCTCCATGTCATATGCTATG-CCAATTTTACGTTGCTAATAA 20450 ||| |||||| | || || || ||| || | | |||||||| ||||| ||| Sbjct 15712110 TTAGACAAGATGGCTCTACCCCCTTGCCAT-TGTTTGGTACAATTTTATGTTGCAAATGG 15712168 Query 20451 TGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAA 20510 ||||| || || || ||||||| |||| || || ||||| | || ||||| || || Sbjct 15712169 CGAATTATCTTGCCAGCTGTATCAGAGATCGGCAGACATGGGCTTAGGAGTTCCATTTAA 15712228 Query 20511 TATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGAT 20559 |||||||| ||||| || | || || |||||||| ||||||||| || Sbjct 15712229 CATTGCAAGCTATGCTCTTTTAACATACATGATTGCTCATGTTACAAAT 15712277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399177179192890