Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_003216.1 Length=40834 Score E Sequences producing significant alignments: (Bits) Value seq89 181 3e-41 >seq89 Length=3091062 Score = 181 bits (200), Expect = 3e-41 Identities = 237/328 (72%), Gaps = 0/328 (0%) Strand=Plus/Minus Query 37622 AATGATGAATCGTGTAGTACTTGTAGGACGATTAACTAAAGACCCTGATTTACGTTACAC 37681 |||||| ||| | || || | || || || ||||| ||||| || || | | || Sbjct 140632 AATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAAC 140573 Query 37682 TCCAGCCGGCGCGGCTGTTGCGACTTTTACGCTAGCAGTAAATCGTATGTTCACTAATCA 37741 || | |||| | ||||||||||||||| ||||||||||| |||| ||| || ||| Sbjct 140572 ACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGC 140513 Query 37742 AAACGGAGAACGAGAAGCAGATTTCATTAATTGTGTTGTTTGGCGCAAACCAGCAGAAAA 37801 | || ||||| ||||||||||||||||||||||| |||| | |||| |||||| || Sbjct 140512 GCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAA 140453 Query 37802 CGTTGCTAATTTCTTGAAGAAAGGAAGCATGGCGGGCGTTGATGGACGTGTTCAAACTCG 37861 || ||| | |||| ||||| || | ||||||||||| || || ||||| | || Sbjct 140452 TGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACG 140393 Query 37862 TAATTATGAGGATAACGACGGTAAACGTGTTTTCGTTACTGAGGTAGTTGCTGAATCAGT 37921 || ||||| | | || || |||||||| || ||||| |||||| ||| || Sbjct 140392 TAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGT 140333 Query 37922 TCAATTCTTAGAACCTAAAAATAACAAC 37949 ||||||| | |||||||||||| | ||| Sbjct 140332 TCAATTCCTTGAACCTAAAAATCAAAAC 140305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130545026552304