Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3 118 2e-21 >seq3 Length=17889087 Score = 118 bits (130), Expect = 2e-21 Identities = 213/305 (70%), Gaps = 10/305 (3%) Strand=Plus/Plus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT-AC 35454 || ||| | || || || || ||||| || ||| | ||||| || || || ||| | || Sbjct 15711936 GGGGATCTTGGGCCTGTTTATGGATTTCAGTGGAGGCATTTCGGAGCCGATTATAAAGAC 15711995 Query 35455 CTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATT---GGCCAATATACTAAAGAC 35511 || | | ||||| || ||| | ||| | || ||||| ||| | || |||| || Sbjct 15711996 ATGCACA-CAGATTACACAGGACAAGGTGTCGACCAATTAATGGC---TGTAATAAACAC 15712051 Query 35512 CCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCT 35571 | | | ||||| |||| |||||||||||||| || |||||||||||| || | Sbjct 15712052 TATTAAAACCAATCCCAATGACCGAAGGATGATTATGTGCGCCTGGAATCCTATGCATTT 15712111 Query 35572 TCACCTTATGGCTCTTCCTCCATGCCACATGACTGCT-CAATTTTATGTGGCTAATGGAG 35630 || |||||||| || || ||||| || || | ||||||||||| || ||||| | Sbjct 15712112 AGACAAGATGGCTCTACCCCCTTGCCAT-TGTTTGGTACAATTTTATGTTGCAAATGGCG 15712170 Query 35631 AATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATA 35690 |||| || |||||| |||||||| || | ||| | || || || || || || || | Sbjct 15712171 AATTATCTTGCCAGCTGTATCAGAGATCGGCAGACATGGGCTTAGGAGTTCCATTTAACA 15712230 Query 35691 TTGCA 35695 ||||| Sbjct 15712231 TTGCA 15712235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989566223978910