Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq105 136 4e-27 >seq105 Length=1502237 Score = 136 bits (150), Expect = 4e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 |||||||| |||||||||| ||||||||||| || || || | || || ||||||| Sbjct 287926 ACCTGAAATTCTCCAGATAGCACTCTTCTTGTGTAAATGTTAGTGGTGTACGGTTCAAAA 287867 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 || |||||||| | | || |||| ||||||||| ||||||||||| || || | |||| Sbjct 287866 GATTCATTATTGCCGAGAATCTGAGCTGTAGATGCTGTAGGCATTGGAGCGATCAAAAGG 287807 Query 37258 CTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCT 37317 ||| || | ||||| | ||| ||| ||| || ||||||| ||||||| ||| Sbjct 287806 GAATTCCTAACACCATGCTTTGCTATTTTCTCTTTGAGAGCATTCCAGTCCCATAGATCA 287747 Query 37318 GTTGGGTTCTTTAACCACATATCATATTGTAGAAT 37352 | ||| || | ||||||||| ||||| | ||| Sbjct 287746 GATGGAGTCACTCCCCACATATCGTATTGCAAAAT 287712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468516589102880