Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 167 3e-36 seq13 84.2 3e-11 >seq3 Length=17889087 Score = 167 bits (184), Expect = 3e-36 Identities = 244/340 (72%), Gaps = 4/340 (1%) Strand=Plus/Plus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 || ||||| ||||| || || ||||| ||||||||||| | || || | ||| |||| Sbjct 15711936 GGGGATCTTGGGCCTGTTTATGGATTTCAGTGGAGGCATTTCGGAGCCGATTATAAAGAC 15711995 Query 70127 -TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCT 70185 ||| | ||||| || | || || ||||| || ||||| | | | || ||||| | Sbjct 15711996 ATGC-ACACAGATTACACAGGACAAGGTGTCGACCAATTAATGGCTGTAATAAACACTAT 15712054 Query 70186 CAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCA 70245 || |||||||| | || | ||||| | |||||| | ||||||||| |||| | Sbjct 15712055 TAAAACCAATCCCAATGACCGAAGGATGATTATGTGCGCCTGGAATCCTATGCATTTAGA 15712114 Query 70246 CCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTA-CTCGTACGATGGCAAAT 70304 | | ||||| ||||| || || || ||||||| || ||||| | | | ||||| ||| Sbjct 15712115 CAAGATGGCTCTACCCCCTTGCCATTGTTTGGTACAATTTTATGTTGCA-AATGGCGAAT 15712173 Query 70305 TGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTG 70364 | || ||| |||||||||| || ||||||||| | || || || |||||||||| Sbjct 15712174 TATCTTGCCAGCTGTATCAGAGATCGGCAGACATGGGCTTAGGAGTTCCATTTAACATTG 15712233 Query 70365 CAAGCTATTCTATGTTGACGCACATGATTGCTCACATTAC 70404 |||||||| || | || || ||||||||||||| |||| Sbjct 15712234 CAAGCTATGCTCTTTTAACATACATGATTGCTCATGTTAC 15712273 >seq13 Length=9188118 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 124982 CAGTAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGC 125041 ||| || ||| | ||||||| ||| ||| || ||||| ||| ||||||||||||||| Sbjct 3475095 CAGGAGGTTTGTCATGTTTCCGATCGAGTACCACGACATATGGAGAATGTACAAAAAGGC 3475036 Query 125042 TCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGG 125085 | || || |||||||| || ||||| |||||||| || |||| Sbjct 3475035 CGAAGCATCGTTTTGGACAGTAGAAGAAGTCGATCTTTCAAAGG 3474992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741046212937520