Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq89 104 3e-17 seq127 95.1 1e-14 >seq89 Length=3091062 Score = 104 bits (114), Expect = 3e-17 Identities = 177/254 (70%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 6482 GCTTCACCAAAACAAACTGCTTTCGCTGCGATAACATGAAGAAGCGGGCCGCCTTGAATA 6541 ||||| ||||| || ||||| || |||||||| || | || || ||||| ||| Sbjct 1263632 GCTTCCCCAAATGCCACAGCTTTAGCAGCGATAACGTGTTCTAATGGACCACCTTGGATA 1263573 Query 6542 CCCGGGAAGATAGCAGAATTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATGAGG 6601 || |||||||| | || | || ||| |||| | || ||| | ||| | Sbjct 1263572 CCTGGGAAGATTGTTTTATCGATTTGCTTTTT-ATATT--CTTCTTTACATAAAATCATT 1263516 Query 6602 CCACCACGAGGGCCGCGCAAAGTTTTATGAGTTGTAGTAGTAACAACGTCGGCACCCCAT 6661 ||||||||||| ||||| || |||||||||||||||||||| |||| || ||| | Sbjct 1263515 CCACCACGAGGTCCGCGTAATGTTTTATGAGTTGTAGTAGTTACAAAATCAGCA---TGT 1263459 Query 6662 TTGAGTGGATTAGCGTGAAGACGAGCAGCAACAAAGCCAGCAAAATGGGCCATATCGACC 6721 | | ||||| | || | || | | || || || || |||| ||| |||||||| ||| Sbjct 1263458 TCTACAGGATTTGGATGTAAACCAACTGCTACTAAACCTGCAATATGAGCCATATCTACC 1263399 Query 6722 ATCAATTTGGCTCC 6735 |||||||| || || Sbjct 1263398 ATCAATTTTGCGCC 1263385 >seq127 Length=259506 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 7013 ACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCGAAATTGCAACTAAAC 7072 ||||| || ||||| || ||||| ||||||||||||||||| || || || || |||| Sbjct 41536 ACTGCTTGATTTGCCTGAGAACCAGAATGAGGTTGAACGTTCGCAAATTTAACACCAAAC 41477 Query 7073 AGTTCTTTAG-CACGCTCAATTGCCAGGTTCTCGATTTCATCGGCTTTTACGCAGCCGCC 7131 |||| | || | ||| || || || | |||| ||||| | | | | || || | Sbjct 41476 AGTT-TACAGAGCCTCTCTATAGCTAGACTTTCGACCTCATCCACATATTCACAACCACA 41418 Query 7132 ATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCCTGTGC 7191 ||||||| ||| || ||||| || || ||||| || ||||| | || ||| || ||||| Sbjct 41417 GTAATACCTTTTCCCTGGATAACCTTCCGCATATTTATTGGTCAGAAAAGAGCCTTGTGC 41358 Query 7192 TTTCATAAC 7200 | ||| || Sbjct 41357 CTCCATCAC 41349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555353467259920