Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 4e-13 >seq13 Length=9188118 Score = 89.7 bits (98), Expect = 4e-13 Identities = 116/160 (73%), Gaps = 3/160 (2%) Strand=Plus/Plus Query 12802 TTAAAAATCAATATCTAGAGAAAATACATCATCGTCCTTATTTGACATAACAGACATTTT 12861 ||||||||| ||| || | ||| |||| ||| || || | | ||||||| ||| Sbjct 3473887 TTAAAAATCTGCATCAAGCGTAAAGACATTATCCTCTTTTCTAGCCATAACACCGGCTTT 3473946 Query 12862 TTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTC 12921 ||| ||||| | |||| | || || ||||||||||| |||||||| | || || | ||| Sbjct 3473947 TTGGTATTCCCCAACTTTCTTCTCGAAAAAGTTTGTCTTTCCTTCGAGAGAGATGTGTTC 3474006 Query 12922 CATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTA 12961 |||||| ||||| || ||| | ||| |||||| ||| Sbjct 3474007 CATAAAGTCGAACGG---GTTCACAGAATTGTATTTCTTA 3474043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430975035857604