Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq157 273 8e-69 >seq157 Length=245904 Score = 273 bits (302), Expect = 8e-69 Identities = 396/549 (72%), Gaps = 10/549 (2%) Strand=Plus/Minus Query 22197 CCCTGGATCGGCGGCAAGCGTCGACTCGCTGACCACATCATCCCGCGCTTTCCGAAGCAC 22256 |||||||| ||||| || || || || || | || || | |||||||||||| ||| Sbjct 174983 CCCTGGATAGGCGGTAAACGGCGGCTGGCAAAACAGATTTTACCGCGCTTTCCGGCGCAT 174924 Query 22257 GACTGTTACGTCGAGGTGTTCGCGGGCGGGGCGGCGCTGTACTTCATGC-GACCGCCAGC 22315 ||| ||||| ||| ||| |||| ||||||||| | ||| ||| | | |||| Sbjct 174923 ACCTGCTACGTGGAGCCGTTTTGTGGCGCGGCGGCGCTCTTCTTTATGAAGTCACCCAGT 174864 Query 22316 CAGGGTCGAGGTGATCAACGATATCAACGGCGAGCTGGTGAACCTGTATCGCGTCGTTCA 22375 ||| |||||||| ||||||||||||||||||||||| || || ||||| || | | Sbjct 174863 AAGGCG-GAGGTGATTAACGATATCAACGGCGAGCTGGTCAATCTCTATCGGGTATTAAA 174805 Query 22376 GCACCATCTCGAAGAGTTCGTGCGTCAGTTCAAATGGGCGCTGACGAGCCGGCAGGTGTT 22435 |||||||| |||||||| |||| ||||| |||||||||||| |||||| | ||| Sbjct 174804 ACACCATCTGGAAGAGTTTATGCGCCAGTTTAAATGGGCGCTGGTCAGCCGGGCGATGTA 174745 Query 22436 CGAGTGGCTGAAGCAT-ACGGTCCCGGAAACCCTCACCGACATCCAGCGTGCGGCACGCT 22494 | ||| | || ||| ||| | || ||| | ||||| |||||||| || || |||| Sbjct 174744 TCAATGG-TTAAACATCACGCCGACCGAGACCTTAACCGATATCCAGCGAGCAGCCCGCT 174686 Query 22495 TCTACTACCTGCAAAAA-AGTTGCTTTGGCGGGAAGCTTGAAGGGCAGACGTTCGGAACG 22553 |||| |||||||||||| || | || ||||| ||| | | | ||| || || || | Sbjct 174685 TCTATTACCTGCAAAAACAGGCG-TTCGGCGGCAAGGTGGCGGAGCACACTTTTGGTTTG 174627 Query 22554 GCGACGACTACGGTGCCGGGCCTGAACCTGCTGCGCATCGAAGAAGAGCTATCGGCGGCG 22613 | || || |||| ||| ||||||||||| | ||||| ||||||||||||||| || Sbjct 174626 ACTACCACCACGGGGCCACGCCTGAACCTGTTACGCATGGAAGAAGAGCTATCGCTCGCT 174567 Query 22614 CACATTCG--TCTCGCGAATGCGTACATCGAGCGGCTCGATTGGGCGACCTGCATCGATC 22671 || | || | || || | | ||| || | || |||||||| | ||| || | | Sbjct 174566 CATCTGCGATTATCACGCA--CCACCATTGAACACCTGGATTGGGCCAGCTGTATTGCCC 174509 Query 22672 GTTACGATCGGCCGCACACGCTGTTCTACCTTGATCCGCCGTACTTCGAGACTGAAGGGT 22731 |||| || || |||||||||||||| ||| || |||||||| | | || ||||| | Sbjct 174508 GTTATGACCGTCCGCACACGCTGTTTTACTGCGACCCGCCGTATTGGGGAACAGAAGGCT 174449 Query 22732 ACGGCGTCG 22740 | ||||||| Sbjct 174448 ATGGCGTCG 174440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175443479036748