Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq43 105 2e-18 >seq43 Length=4351604 Score = 105 bits (116), Expect = 2e-18 Identities = 140/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 33725 ACAGGATAATGCGCTCTGA-GTTTCCCGATTATCGAGAACTGTTCAGGGAGTCTGACATC 33783 ||||||||| || || | | | | | |||| ||| |||| || || || || || || Sbjct 2763272 ACAGGATAAAGCACTTTTAAGCCTGTCAATTACCGATAACTTTTGAGTGAATCCGATATT 2763213 Query 33784 AAGAGCGCGGTAGCCTTTTTTAATATTTCATTCTCCATTTCAATGCGTTGTAGCTTTTTC 33843 |||||| | |||||||||||||| || | |||||||||||||| | |||| | |||||| Sbjct 2763212 AAGAGCTCTGTAGCCTTTTTTAAGATGTTATTCTCCATTTCAAGGTGTTGAATTTTTTTC 2763153 Query 33844 CTGAGCTCACGGATTTCAATTTGTTCCGG-GGTAATGGGGGAGGCTTTTGGTGTTTTGCC 33902 | | ||| || |||||||| ||| || | |||| | | || |||||||||| || Sbjct 2763152 TTCATTACACTGAGTTCAATTTATTCTGGAGTTAATAGAAG-CCCTGTTGGTGTTTTTCC 2763094 Query 33903 C-TGACGCT 33910 | ||||||| Sbjct 2763093 CTTGACGCT 2763085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124813921969620