Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_005356.1 Length=41708 Score E Sequences producing significant alignments: (Bits) Value seq89 89.7 1e-13 >seq89 Length=3091062 Score = 89.7 bits (98), Expect = 1e-13 Identities = 181/264 (69%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 22454 ATGTTATTATCGTTCAGTATAAAATCGCGTATCTGTATTACCTGTTCCATCTCTAAATAG 22513 ||||| || | ||| | |||||| || ||||| | || || || ||| || | |||| Sbjct 2303710 ATGTTTTT-TAGTTAA-TATAAATTCACGTATTTTTAACACTTGAATCATTTCAAGATAG 2303653 Query 22514 TTATACATTTTCGCTTCTTCTTTTTCTATATCTTCTATCGTCTTACTCTTCTTTGGTAGT 22573 ||||| ||||| |||||||||||| |||||||||| || ||| ||||| ||| | Sbjct 2303652 TTATATATTTTT--TTCTTCTTTTTCAATATCTTCTAGAGTTTTAGCTTTCTTAAGTACT 2303595 Query 22574 GTGACGCTATTTAATATGTGTTCGTTTGGATAATTGTAAAATTTAACGGCGTATTTAATA 22633 || |||||| || || | || | || | |||||||| || ||| | | Sbjct 2303594 TCTACATCATTTAACATATGCTTATTAGTGTATCTATAAAATTTCGTTGCATATGCTAAA 2303535 Query 22634 GCTTCTTTCATATGTCCAAGTTGACGCTTTACCTGATTTGCAGAATATACGTTTGATAAT 22693 |||| |||||||| |||||| || | || || ||| | ||||| | || |||||| Sbjct 2303534 GCTTTTTTCATATCATTAAGTTGTCGTATAACTTGGTTTTCTGAATAAATTTTAGATAAT 2303475 Query 22694 TTGTTAATAAATGTTTG--CATGT 22715 | || || | | |||| ||||| Sbjct 2303474 GTATTGATTAGTTTTTGGACATGT 2303451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133341779989080