Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_005357.1 Length=42493 Score E Sequences producing significant alignments: (Bits) Value seq157 242 1e-59 >seq157 Length=245904 Score = 242 bits (268), Expect = 1e-59 Identities = 490/728 (67%), Gaps = 2/728 (0%) Strand=Plus/Minus Query 36685 GCGATGGCGGGACACGATGGTCAAGGCCCTGGCGCACTCGCTGCCCGGCGCGCTGGGCGA 36744 ||| |||||||| || ||||||| ||| ||||||||| |||| || |||||||||| Sbjct 217771 GCGCTGGCGGGATACAATGGTCAGGGCGCTGGCGCACGGCCTGCAGGGATCGCTGGGCGA 217712 Query 36745 TCTGTGCGACATCCTCAAGGTGCCGACCGACAAGGCCAAGGACAAGGCCGGCAAGCAGCT 36804 |||||| ||||| |||| || || | || |||||||| ||||| || ||||| || Sbjct 217711 TCTGTGTGACATTCTCAGTGTTTCGCAGGCTAAAGCCAAGGATAAGGCTGGTAAGCAACT 217652 Query 36805 AATCATGCTGTTCTGCAAACCGCGTCCAGCCACCAGCAAGCTGCGCCGCGCCACGCGCGA 36864 ||| ||| ||||| || || || || | |||| | |||||||| || | | Sbjct 217651 GATCCAGCTATTCTGTAAGCCTCGACCCAAAAACAGCGCTATCCGCCGCGCTACCACCAA 217592 Query 36865 AACGCACCCCGCCGAGTGGGCCAAATTCGTGGAGTATGCCGGCCTCGACATCGAAGCCAT 36924 ||| ||||| | ||||||| ||||| ||||| ||||| || || || || ||||| Sbjct 217591 AACACACCCTGTCGAGTGGCAGCGCTTCGTTGAGTACGCCGGACTGGATATTGATGCCAT 217532 Query 36925 GCGCGTGATTGACCAGAAGCTGCCGGCCTGGAACTACCAAGGCACCGAGTTGGCGCTATG 36984 ||| | ||| ||| | ||||| || ||||||| ||| ||| || ||||||| || Sbjct 217531 GCGTGAGATCGACAAAAAGCTACCTACCTGGAATTACTCAGGTCAGGAACTGGCGCTCTG 217472 Query 36985 GCACCTCGACCAGACCATCAACGACCGCGGCGTGATGGTCGATACCGACCTCGCCCACGC 37044 ||| | || ||| || || || |||||| | || | |||| || || | ||||| Sbjct 217471 GCATCGTGATCAGCGTATTAATGATCGCGGCTTTCTGATTGATATGGATCTTGTCCACGG 217412 Query 37045 CGCCATCCGCGCCGTGGAGCGTACGCAGAAGGTGCTCGCGGCGCGCACCAGTGACATAAC 37104 ||||| || || || || | |||| || || | | || || || ||||| Sbjct 217411 GGCCATTCGTGCTGTAGACAGAGCGCAAAAACGCCTTTCAGAACGTACTCTCGATATAAC 217352 Query 37105 CCTGGGCGCGGTGCAGGCGGCCACGCAGCGCGATGCCATGCTGCGCCACGTGCTCGCGGC 37164 ||| | ||||| || | || || |||||||||||| | || | ||| | | Sbjct 217351 TGAGGGGGAAGTGCAAGCCACAACTCAACGCGATGCCATGTTAAAACATCTCATCGAGTC 217292 Query 37165 CTACGGCCTCGAC-CTGCCAGACATGCAGCAATCGACGCTGGAACGACGCATTGCCGACC 37223 |||||| | ||| |||| || ||||| || || |||||||| || || | |||| Sbjct 217291 CTACGGTGT-GACTTTGCCTGATATGCAAAAAAGCACACTGGAACGCCGAATATCAGACC 217233 Query 37224 CCGACCTGCCGGCCGAACTGCGCGAACTGCTGGGTATCCGGTTGCAGGCCAGCACCANNN 37283 |||| | || | | | || ||||| |||| || || |||| |||||| ||| Sbjct 217232 CCGAATTACCACCAGCAGTGAAAGAACTACTGGCAATACGCCTGCAAGCCAGCGCCACCA 217173 Query 37284 NNNNNNNNAAATACAAAACCCTCGCCAAGGGCGTGAGCAGCGACGGCCGCCTGCGCGGCA 37343 ||||| ||||| | || || ||||| || ||||| || ||||||| Sbjct 217172 GCACCAGTAAATATAAAACTTTACTCAGATCAGTTAGCAGTGATGGCCGTCTTCGCGGCA 217113 Query 37344 CGTTGCAGTTCAACGGCGCCAGCCGCACCGGACGCTGGGCCGGCCGCCTGTTCCAACCGC 37403 || |||| || ||||| || || || | ||||| || || || |||||||| | Sbjct 217112 CGCTGCAATTTTGTGGCGCATCACGAACAGGCAGGTGGGCTGGGCGGCTTTTCCAACCCC 217053 Query 37404 AAAACCTG 37411 |||||||| Sbjct 217052 AAAACCTG 217045 Score = 161 bits (178), Expect = 3e-35 Identities = 363/538 (67%), Gaps = 12/538 (2%) Strand=Plus/Minus Query 37951 CTGCGATGCGCTCAAGCGCCTGTGGCGCCGCGCGCATCCGGCGGTTTCGTCGTTCTGGAA 38010 ||||||| ||||||| || ||||||||| || || || | | | | |||||| | Sbjct 214854 CTGCGATTCGCTCAAACGACTGTGGCGCAATGCCCACCCTGAAATAACCGCTTTCTGGTA 214795 Query 38011 GGAACTGGAAGAAGCCGCACGCCTGGCGGTGTTGCGGC--CGGGTACGACCTACGACTGC 38068 ||||||||||| |||| || | ||| |||| | | || | ||| |||| Sbjct 214794 TGAACTGGAAGATGCCGTCCGGC--GCGCCATTGCCACACCCGGCATAACCATTTCCTGC 214737 Query 38069 CGCACGCTCAAGGCCCGGCGCGACGGCGCCTGGCTGCGCATCCGCCTGCCGTCCGGCCGA 38128 |||| | || || |||||||| |||||| || || | || || || ||||| Sbjct 214736 CGCAAATTAAAACTTCGCCGCGACGGAAGCTGGCTACGTATTCAGCTTCCCTCTGGCCGG 214677 Query 38129 TTCCTCTGCTACCCCAGCCCGCAACTGGATGACGCCGGCAAGCTGTCCTACATGGGCGTC 38188 |||| || ||| || | | | || ||| ||||||| | |||||||||| || Sbjct 214676 GCGGTCTGTTATCCCGGCGCACGTATCGACGACAGCGGCAAGATCAGCTACATGGGCATC 214617 Query 38189 AACCAGTACAGCCGGAAATGGTCACGCCTCAAGACCTACGGCGGGAAGCTGGCAGAAAAC 38248 ||| ||||||||||||||| |||||| | ||||||||||| ||||||||||| ||| Sbjct 214616 AACACCTACAGCCGGAAATGGCAACGCCTGCAAACCTACGGCGGCAAGCTGGCAGAGAAC 214557 Query 38249 GTTACGCAAGCCGCAAGCCGCGACGTGCTCGCGGCCAACATGCCCGCCATCGAGGCGGCC 38308 || || || || | ||| || ||| | || || || ||||||| | |||| | Sbjct 214556 GTAACCCAGGCTACCGCCCGTGATGTGATGGCCGCGAATATGCCCGGTGTGGAGGACAGC 214497 Query 38309 GGCTACCAGATCGTGCTGTCGGTACACGACGAAAACATCACCGAAGCCGACGACCGCGAC 38368 |||||| | ||| | ||| |||| || ||||| | | || ||||| || | | | | Sbjct 214496 GGCTACGACATCATACTGACGGTGCATGACGAGATTTTAACGGAAGC--ACCAGCCCATC 214439 Query 38369 --GA--ATTCAGCGCCGCCCACCTGGCCGGCCTGATGGCTACCAATCCCCCCTGGGCCGC 38424 || ||||| | || || || || || | | || |||||| | ||||| | Sbjct 214438 CTGATTATTCA-CACC-AGCATCTAAGCGATCTCCTCTCCACTAATCCCGCATGGGCTGA 214381 Query 38425 TGGCCTGCCGCTCGCCGCGGCCGGCTTTGAAGCCTATCGCTATCGGAAGGACTGACCC 38482 || ||||||| | |||| |||||||| || ||||| ||||| ||||| | |||| Sbjct 214380 AGGATTGCCGCTGTCAGCGGGTGGCTTTGAGGCATATCGATATCGTAAGGAGTAACCC 214323 Score = 120 bits (132), Expect = 8e-23 Identities = 261/389 (67%), Gaps = 4/389 (1%) Strand=Plus/Minus Query 35699 GGCCATCGAGCAGGTCGCCAAGGAAAAGTGGGGCGCCAAGGCCGACGCCGTGCTCAAGCA 35758 ||| |||| ||||| || || ||||| ||||| | || |||||| ||| || || Sbjct 218528 GGCTATCGCTCAGGTAGCTAAAGAAAAATGGGGGCCGAAAGCCGACAGCGTTCTTAAATC 218469 Query 35759 GATGCGCGCCCAGGAC--AAGGTGTGCCTGCACGATGGCGACCTCAAGGCCAACTACGAC 35816 | ||| || || | || || |||||||||||||| || || || | ||||| Sbjct 218468 CTTACGCACC--GGCCTGAAAGTCTGCCTGCACGATGGAGATGAAAAAGCAGAATACGAG 218411 Query 35817 GGCTTCCCCGGCAACCTGTACGTGTCCGCGCGCAGCGCCACGCGCCCGCTGGTCATCGAC 35876 |||| |||| || || || ||||| | | | || || ||||| |||||| Sbjct 218410 GGCTATCCCGATAATAAGTTTGTCTCCGCCAGTAATAAAGCCCGACCACTGGTTATCGAC 218351 Query 35877 AAAGACCGCAGCCCCCTGGCCGAGGCGGATGGCAAGCCCTACGCGGGCTGCTACGTCAAC 35936 || || | | ||| ||| || |||||||||| || || || ||||| || ||| Sbjct 218350 CGTGATCGTTCCGCGCTGACCGCCGCCGATGGCAAGCAGTATGCAGGTTGCTATGTTAAC 218291 Query 35937 GCCAGCATCGAACTGTGGGCGCAGGACAACAACTACGGCAAGCGCGTGAATGCGGGCCTG 35996 |||| |||||| | |||||| ||| ||||| | ||||| || | || || || Sbjct 218290 GCCACCATCGATATCTGGGCGATGGATAACAATTTTGGCAAACGTATTAACGCTTCGCTC 218231 Query 35997 CGCGGCGTGCAGTTCCTGCGCGACGGCGACGCCTTCGCGGGCGGTGGTGTCGCGAGCGAG 36056 | || || |||||| ||||| || ||||||||||| || || || || |||| | Sbjct 218230 GGTGGAGTTCAGTTCTGCCGCGATGGTGACGCCTTCGCTGGAGGCGGCGTGGCGACGCCG 218171 Query 36057 GACGAGTTCGACGACATCACCGAGGGCGC 36085 || || ||||| | || | ||| ||||| Sbjct 218170 GATGACTTCGAGAATATGAGCGAAGGCGC 218142 Score = 91.5 bits (100), Expect = 4e-14 Identities = 200/300 (67%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 37496 GTCATGGAACTGACCAGCAGCGCGATACGCGGCTGCATCGTGGCGCCCGAGGGCAAGAAG 37555 || ||| ||||| | || ||| | |||||||||||| |||| || | ||| || || Sbjct 215306 GTTATGCAACTGGCAAGTTCAGCGTTGCGCGGCTGCATCATGGCCCCTGCGGGTAAAAAA 215247 Query 37556 CTGGTCGTCGCCGACCTGTCGAACATCGAAGGACGCATGATTGCGTGGCTCGCCGGCGAG 37615 ||||| || ||||||| |||||||| |||||| | | || |||||||| | || Sbjct 215246 CTGGTGGTGTCCGACCTTAGCAACATCGAGGGACGCGTACTGGCATGGCTCGCGGAAGAA 215187 Query 37616 GATTGGAAGCTGGCCGCTTTCCGTGAATTCGACGACGGCGCCGGCCCCGACCTCTACAAG 37675 || || || | || || ||||| | |||| ||| | || | ||||| |||||| Sbjct 215186 GACTGAAAATTACAGGCGTTTCGTGATTATGACGCGGGCACTGGACATGACCTGTACAAG 215127 Query 37676 CTGGCCTACGCCAAAGCCTTCGCGGTGTCGCCTGATTCGGTCGATAAAGACCAGCGCCAG 37735 ||||| || || ||||| | ||||| ||| |||||||| || || Sbjct 215126 CTGGCTTATGCACGGGCCTTTCGTATAAACCCTGACGATGTCTCAAAAGACCAACGTCAA 215067 Query 37736 ATTGGCAAGGTCATGGAACTGATGCTGGGCTACGAGGGCGGCGTCGGTGCCTTTCTCACC 37795 || || |||||| | ||| | || || || |||| || |||| || || || ||| Sbjct 215066 ATCGGTAAGGTCCTCGAATTAGCTCTAGGGTATCAGGGAGGGGTCGCCGCTTTCCTGACC 215007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135853738167420