Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_005887.1 Length=42415 Score E Sequences producing significant alignments: (Bits) Value seq157 82.4 2e-11 >seq157 Length=245904 Score = 82.4 bits (90), Expect = 2e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 29484 GGCGCTTCTGTAATCAGTTCGTCGTGGATGGACAGCACGATGTCGTAGCCGGCGGCCTCG 29543 || ||||| || | | ||||| || | | ||| | ||||||||||||| | |||| Sbjct 214447 GGTGCTTCCGTTAAAATCTCGTCATGCACCGTCAGTATGATGTCGTAGCCGCTGTCCTCC 214506 Query 29544 ACGGCGGGCGCGTTGTAGAACAGCACGTCGCGCGCGACGGCCTGGCACAGGTTCTCGAAG 29603 || ||||| || | || ||| || || ||| |||||| | |||||| Sbjct 214507 ACACCGGGCATATTCGCGGCCATCACATCACGGGCGGTAGCCTGGGTTACGTTCTCTGCC 214566 Query 29604 ATCTTCCCGCCGTACGTCTTCGTGCGCTGCCACTTCCGGGTGTACTGGTTCACGCCCATA 29663 | ||| |||||||| || | | ||| ||||| |||||| |||| ||| | |||||| Sbjct 214567 AGCTTGCCGCCGTAGGTTTGCAGGCGTTGCCATTTCCGGCTGTAGGTGTTGATGCCCATG 214626 Query 29664 TAGCTGATCTCGCCG 29678 |||||||||| |||| Sbjct 214627 TAGCTGATCTTGCCG 214641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135604142322948