Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq89 107 2e-18 >seq89 Length=3091062 Score = 107 bits (118), Expect = 2e-18 Identities = 305/458 (67%), Gaps = 27/458 (6%) Strand=Plus/Minus Query 6694 ATAGCTGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATA-- 6751 ||||| ||||||| | |||||||| | ||| ||||||||| | || | ||| | | Sbjct 2013617 ATAGCAGGATGAGATTCATAATCTACAATTTCTAAATCTTCATAATTTATATCGAAAATT 2013558 Query 6752 -AATTATCAGACtttttttttAATATTACAACAGGTGAAGGTTTTATTGATCGAGT--TA 6808 || ||||| || |||| | | | ||||| | | || ||| || || Sbjct 2013557 GAAGCGTCAGAATTAATTTTAAGTTT------AGGTG--GTTCGTAACTATCACGTGATA 2013506 Query 6809 ATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAA 6868 ||||| || ||| || | ||||||| | | |||||||||||||| || | ||||| | Sbjct 2013505 ATTGTGTTTCTATCGCATCGATATGATTTGAGTAAATATGAGCATCACCAAAAGTATGCA 2013446 Query 6869 TAAATTCACCTGGTTTCATATCAACA-GCTTGAGCAATTAAATATGTTAATAATGCATAA 6927 |||||| || | ||| | | ||| ||| ||| ||||| | |||||||| |||| Sbjct 2013445 CAAATTCTCC-GACTTCTAAACCACATTCTTTAGCTATTAAGTGCGTTAATAAACTATAA 2013387 Query 6928 GAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAA 6987 || | ||||| || |||||||| ||||| || ||| ||||| |||| ||| Sbjct 2013386 CTTGCAATGTTAAATGGCACACCTAAGAATATATCAGCACTTCTCTGATATAATTGGCAA 2013327 Query 6988 GATAAAATATTGTCTATAGCATAAAATTGACACAATACATGACATGGAGGTAAAACAGCC 7047 || | ||| | |||||||||| ||| ||| ||||| ||||| |||| Sbjct 2013326 CTCAATTTTCCATCTTGAACATAAAATTGGAACATCGTATGGCATGGTGGTAA---AGCC 2013270 Query 7048 --TG-ATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTA--TCATTTGGAT 7102 || ||| || |||| ||||||||| |||| || ||| ||||| | || | Sbjct 2013269 ATTGTATCAATTTCAGTTGGATTCCACGCAGAAAT---GATATGTCTACGAGAATTAGGG 2013213 Query 7103 TTGTTTTTAATTTTGTT-ATAATTATTTGTAATTGATC 7139 || |||||||||| || || | | ||| ||| ||||| Sbjct 2013212 TTATTTTTAATTTGATTAATTACTGTTTTTAACTGATC 2013175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595861557343200