Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq38 82.4 4e-11 >seq38 Length=6425308 Score = 82.4 bits (90), Expect = 4e-11 Identities = 163/238 (68%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || ||||| || || || || |||||||| ||||| || | || ||| || |||| | Sbjct 4247011 GGATTCTCAGTGGAAGGCCAGGAAAATATCCAAGAGTTGCTGTCAAAACAGTTGTACCTT 4247070 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 || ||||| | | || | | ||| | || || || | |||| |||||| Sbjct 4247071 TGCCAATGCCTTGTGGCTCTAAGCATCGTCAGACCATACGGCCACTTTGTTTGCAAATTG 4247130 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAAT 4081 || ||| | || |||| || ||||| || | || ||||||||||| ||||| ||| || Sbjct 4247131 TTTGATTTGTTCTCACCGTTCAGTGCAGGGCTTGTCTATTTGATGTACAGATCATTTGAT 4247190 Query 4082 CGTATTTGTATTTTCAAACC--ACATTCATCGCGACCGGCCAATTCTGAAAGATATTT 4137 ||||| ||||| || || ||| || | ||||| || ||||| ||||| || || Sbjct 4247191 AAGATTTGCATTTTTAAGCCTAACA-CCAGC-CGACCTGCTAATTCAGAAAGGTAATT 4247246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276548874563206