Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq89 138 2e-27 >seq89 Length=3091062 Score = 138 bits (152), Expect = 2e-27 Identities = 282/410 (69%), Gaps = 12/410 (3%) Strand=Plus/Minus Query 156661 GCATTATTAAGTGTATCCAATAAAACTGGTATTGTAGATTTTGCAAGATCTCTAGTTGAT 156720 ||| | |||||||| || |||||||| || ||||||| ||||| ||| ||| | || Sbjct 2432612 GCAATTTTAAGTGTGTCTAATAAAACAGGGATTGTAGCGTTTGCGCAATCACTAATAGAA 2432553 Query 156721 TATGGATATACTATCAT-TTCTAGTGGTGGAACACATTC-TGTAATAGCAGCAGAAGGAA 156778 | || ||| || || ||| | ||||| || || | || ||| || | || || Sbjct 2432552 AACGGTTATGA-ATTATATTCAACAGGTGGCACG-ATGCGTGCAATTGCTGAAGCGGGTG 2432495 Query 156779 TACCTGTAA---CTAAGGTTTCTGATTATACTGGATCACCAGAGATTCTTAATGGAAGAG 156835 ||||||||| ||| ||||||| | || || ||| ||| | | || |||| Sbjct 2432494 TACCTGTAAAATCTA---TTTCTGACTTAACGCAATTTGAAGAAATTATGGACGGCAGAG 2432438 Query 156836 TGAAGACATTACATCCAAAGATTCATGGTGGTATTCTTGCACAGCGTGGTAATCCTGTAC 156895 | ||||||||||||||| | |||||||||||| | ||| | |||| ||| |||| || Sbjct 2432437 TTAAGACATTACATCCATCTGTGCATGGTGGTATTTTAGCAGATCGTGATAAACCTGAAC 2432378 Query 156896 ATG-ATATGGATCGTAATGCAAATGATATTGGATTGATTGATATTGTTGCAGTAAACTTA 156954 || | | || || | | | |||||| || || ||||| || | || || | Sbjct 2432377 ATTTAGAACAATTAAAA-GAACAACATATTGATTTAATAGATATGGTCGTCGTGAATCTT 2432319 Query 156955 TATCCTTTCGCAGAAACAGTTGCTAAACCAGATGTAACTCTTGCAGATGCAATAGAGAAT 157014 || || || |||||| |||||||| ||||||||||| | || ||||| || ||| Sbjct 2432318 TACCCGTTTAAAGAAACGGTTGCTAACCCAGATGTAACAGAAGGTGACGCAATTGAAAAT 2432259 Query 157015 ATTGATATTGGTGGTCCTAGTATGGTGAGATCAGCAGCAAAGAATTATAA 157064 |||||||||||||| |||| ||| | | ||||||| || || | ||| Sbjct 2432258 ATTGATATTGGTGGCCCTACAATGTTACGTGCAGCAGCTAAAAACTTTAA 2432209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807541047595120