Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq157 152 2e-32 >seq157 Length=245904 Score = 152 bits (168), Expect = 2e-32 Identities = 281/406 (69%), Gaps = 11/406 (3%) Strand=Plus/Plus Query 39102 CGCGATGGCGAGCTGCTGCAGGTCAAGCGAATCAGTACTGAACGTCCGGACGGGAAGAAA 39161 ||||| || ||| || ||| |||| || | | | ||| |||| ||||| || ||| Sbjct 41837 CGCGACGGTGAGTTGAAGCAAATCAAACGGTTGGGGATTGAGCGTCATGACGGTAAAAAA 41896 Query 39162 GTCATCATGGCAGAAGGTGACTGTGAACCTTGCCTGTTCGGGTGGCAAGCTCTCGATGCT 39221 |||||||||| || || |||||||| || ||||| || ||||| || || | | Sbjct 41897 ATCATCATGGCGGAGTCCGATTGTGAACCCTGTCTGTTTGGCTGGCAGGCCATCAACCCC 41956 Query 39222 GGCGTGAGGGC-----GGTTGTGCTTTGCGAAGGCGAAATTGATTGCATGAGCTATGC-G 39275 | || || ||| ||| |||| |||||||||||||| |||||| ||| | Sbjct 41957 AAAG--AGCGCAATCTGGTGGTGATTTGTGAAGGCGAAATTGACGCCATGAG-TATTCAC 42013 Query 39276 CAATACGGGATCCCGGCGCTATCTGTCCCGTTCGGTGGCGGGAAAGGCGCCAAGCAACAG 39335 || ||||| | ||||| || || || || ||||||||||| | || |||||||| ||| Sbjct 42014 CAGTACGGCCTTCCGGCACTGTCGGTTCCCTTCGGTGGCGGAACGGGGGCCAAGCAGCAG 42073 Query 39336 TGGATTGAGTTCGAATACCACAACCTCGACAGGTTT-GAAGAAATATTCATTTCGATGGA 39394 ||||||||| || ||| | || || | || |||| ||||| |||||| | | ||||| Sbjct 42074 TGGATTGAGCATGAGTACGAAAATCT-GTCACGTTTCGAAGAGATATTCCTGTGCATGGA 42132 Query 39395 CGTTGACGATGTCGGGCGTGAAGCAGCAAGGGAAATCGCAAGCCGACTTGGTGAGCATCG 39454 | | |||| | ||||| || || | |||||| || | ||| || || ||||| Sbjct 42133 CATGGACGCCGCCGGGCAATCCGCCGCCAAGGAAATTGCTACCCGTCTGGGGATCCATCG 42192 Query 39455 CTGTCGTCTGGTTACACTGCCACACAAAGATATCAACGAATGCCTG 39500 || | | || | ||| || ||||| || |||||||||||| Sbjct 42193 TTGCAGCTTTGTGAAACTCCCTCACAAGGACGCTAACGAATGCCTG 42238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149955903380088