Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq127 138 1e-27 seq89 96.9 4e-15 >seq127 Length=259506 Score = 138 bits (152), Expect = 1e-27 Identities = 212/298 (71%), Gaps = 6/298 (2%) Strand=Plus/Minus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 ||||| |||| || ||||||||| || || | | | || | |||||| || | Sbjct 41611 CCATGAGTTAGGTGTCCACCGCAACTCAGCGATAATCCAAGTATCGTATCGCCCGGGGTA 41552 Query 6986 AGCAACGCATGGTAAACA--GCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTG 7043 ||||| | | | ||||| ||||| |||||||| ||||| ||||| ||||||||||| | Sbjct 41551 AGCAATGAA--GCAAACACTGCTTGATTTGCCTGAGAACCAGAATGAGGTTGAACGTTCG 41494 Query 7044 CGAAATTGCAACTAAACAGTTCTTTAG-CACGCTCAATTGCCAGGTTCTCGATCTCATCG 7102 | || || || |||||||| | || | ||| || || || | |||| |||||| Sbjct 41493 CAAATTTAACACCAAACAGTT-TACAGAGCCTCTCTATAGCTAGACTTTCGACCTCATCC 41435 Query 7103 GCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTA 7162 | | | ||||||| | |||||||| ||| |||||||| || || ||||| || ||||| Sbjct 41434 ACATATTCACAACCACAGTAATACCTTTTCCCTGGATAACCTTCCGCATATTTATTGGTC 41375 Query 7163 AAAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCA 7220 | || ||| ||||| || | ||| || | | | || | ||||| |||||||||| Sbjct 41374 AGAAAAGAGCCTTGTGCCTCCATCACTGCTTTGCTTGCAAAATTTTCTGATGCAATCA 41317 >seq89 Length=3091062 Score = 96.9 bits (106), Expect = 4e-15 Identities = 205/298 (69%), Gaps = 10/298 (3%) Strand=Plus/Minus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCC-TGGACT 6984 ||||||||||| || ||||| | ||| ||| | ||||| | ||| || || || Sbjct 1263191 CCATGTGTTAAGTGCCCACCATGACTTAAATTCATACCTAATACAGTATCACCGTGTTCT 1263132 Query 6985 CA-GCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTG 7043 | || ||| | |||||||| ||||| || ||||| || || ||||| ||||| Sbjct 1263131 AATGCTACGA--GATAAACAGCCATATTTGCTTGAGAACCTGAGTGTGGTTGTACGTTAA 1263074 Query 7044 CGAAAT-TGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCA--GGTTCTCGATCTCAT 7100 | | |||| | ||| | || ||| ||||| ||||| || | | |||| | | || Sbjct 1263073 CATGTTCTGCACC-AAATAATTTTTTGGCACGATCAATCGCTAAAGCTTCTGAAAC--AT 1263017 Query 7101 CGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGG 7160 | | | ||||||| || || || | | || ||| || || |||||||| ||||| | Sbjct 1263016 CCACAAATTCACAACCACCATAGTATCTTCTGTTTGGGTAGCCTTCAGCATATTTGTTAG 1262957 Query 7161 TAAAAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAAT 7218 | || | ||||||||||||| |||||| | || || || ||||||| || ||||| Sbjct 1262956 TTAATACTGAACCTTGCGCTTCCATAACCGCTTCTGATACGAAGTTTTCTGAAGCAAT 1262899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553343902478160