Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_007023.1 Length=180500 Score E Sequences producing significant alignments: (Bits) Value seq157 152 6e-32 >seq157 Length=245904 Score = 152 bits (168), Expect = 6e-32 Identities = 783/1225 (64%), Gaps = 74/1225 (6%) Strand=Plus/Minus Query 155619 GCCCGTGCATACATCGAATATCGTCACGATCGCGATATTGCCCGTGAACAGAAAAGTAAG 155678 || ||| | ||||| || || ||||||||||| ||| | ||||| ||||| | | Sbjct 54063 GCGCGTACCTACATTGAGTACCGTCACGATCGTGATGTCGCCCGCGAACA----ACGCTG 54008 Query 155679 CTGTTCAAA----GATATCTCCGGTATGGTGAATCTGTCCAACAAAGAGATCACCAACGA 155734 | ||| || || || |||| |||| | | | ||||| | | |||||| Sbjct 54007 CCGTTTGAATCAGGAAATTCGCGGTCTGGTTGAACAGAGCAACATGGCTCTGCTCAACGA 53948 Query 155735 GAACGCGAACAAACACGCAAGGGTATTCCCGACACAGCGCAATTTGCTGGCGGGTATTGT 155794 |||||| |||||| || | || |||| || |||||| | ||||||| ||||| || Sbjct 53947 GAACGCCAACAAAGACAGTAAAGTGATCCCTACCCAGCGCGACCTGCTGGCCGGTATCGT 53888 Query 155795 AGCGAAGCATTTCGCCCGTAATCATATCCTTCCGAAACATATCGTAGAAGCGCATGACTC 155854 || ||||| | ||| | |||||||| ||| | | || || ||||| Sbjct 53887 TGCCAAGCACTATGCCAAGCAACATATCCTGCCGCGCGACGTGGTGATTGCCCATGAACG 53828 Query 155855 CGGCGACATCCACTATCATGATCTGGATTACAGCCCGTTCACGCC-ATACACAAACTGCT 155913 ||| || || ||||| || |||||||| ||| ||||||| || || ||| ||| Sbjct 53827 CGGTGAAATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTCAA-CTGTA 53769 Query 155914 GTCTGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAGACATCG 155973 || | || | |||| ||| || | || || |||||||||||||||||||| || | Sbjct 53768 TGCTTATCGACCTTGAAGGCATGTTGACCAAAGGGTTCAAGATGGGTAACGCAGAGATTG 53709 Query 155974 AACCCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCACAGATTG 156033 | || || ||||| ||| ||||| || | | ||| || |||| ||| ||| | | Sbjct 53708 AGCCGCCAAAATCCATCTCAACCGCGACGGCAGTGACGGCCCAAATCATCGCGCAGGTGG 53649 Query 156034 CTTCTCACCAGTACGGCGGGACAACCTTTGCAAACG--TGGATAAAGTGCTGGCTCCGTA 156091 | ||| |||||||| || ||| || || || | ||| || | ||||| |||| Sbjct 53648 CAAGCCACATCTACGGCGGCACCACCATT--AACCGTATCGATGAAATTCTGGCACCGTT 53591 Query 156092 TG-CAGAAAT-GACATATGAAAAGCATGTTAAGGATGCTAAAAAGTATAAAATTTCGTTA 156149 | || | | |||| ||||||| | ||| | ||| | ||| | Sbjct 53590 CGTCACCGCTAGCCATA--AAAAGCACCGGGAAACCGCTGATGAGTGGCACATTCC---C 53536 Query 156150 GAT-CGTA--CATATGCGATGGAAAAGACTGAAAAAGATGTG-TTTGATGCTTTCCAATC 156205 ||| || | | |||||| || || | | ||| | || || ||||| || Sbjct 53535 GATGCGGACGCCTATGCGCTGTCTCGTACCTAGA-----GTGCTACGACGCCTTCCAGTC 53481 Query 156206 GTATGAATACGAAGTTAACACGCTGCATACTGCCAACGGACAAACACCTTTCGTTACTAT 156265 | ||||| ||||| || |||||||| |||||||| || || || || ||||| || | Sbjct 53480 GCTGGAATATGAAGTAAATACGCTGCACACTGCCAATGGTCAGACGCCGTTCGTCACCTT 53421 Query 156266 TACTTTCGGTACTGGTAC-----GGGAATGTTTGAACGGATGATCCAGAAAGCTATTCTG 156320 | ||||| || || |||||| || |||||||| || | || ||| Sbjct 53420 TGGTTTCGACCTCGGCACCAGTTGGGAAT-----CGCGTCTGATCCAGCAATCCATCCTG 53366 Query 156321 AAAAACCGTATCCGTGGCCTGGGTAAAAAAGGTATTACTCCGGTATTCCCTAAACTGGTT 156380 |||||||| || ||||| ||||| ||| ||| |||| ||||| ||||||| Sbjct 53365 CGCAACCGTATTGCCGGTCTGGGCAAAAACCGTAAAACTGCGGTGTTCCCCAAACTGG-- 53308 Query 156381 ATGTTC---ATGGAAAAAGGCATTAACCTTGATCCAGAGGATCGCAACTATGACATCAAA 156437 ||||| || | || | || | | | | |||| |||||||||||||| Sbjct 53307 -TGTTCGCTATCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGACATCAAG 53249 Query 156438 CAACTGGCTCTGGAATGCGCTTCAAAACGTATGTACCCAGATATCATTAGTGCATATAAT 156497 |||||||| ||||| ||| | || || |||||||| |||||| | | | || || Sbjct 53248 CAACTGGCACTGGATTGCTCCAGCAAGCGGATGTACCCGGATATCCTCAAT---TACGAT 53192 Query 156498 AACCGTCGCATCACTGGTTCTAGCGTTCCTGTA--TCTCCTATGGGTTGTCGCAGTTTCC 156555 | || | | | |||| | | || | || | || ||||| || | ||| |||| Sbjct 53191 CA-GGTTG--TTA-AGGTTACCG-GCTCGTTTAAGACGCCCATGGGCTGCCACAGCTTCC 53137 Query 156556 TTAGTGTGTGGCATGATGATAACGGTAATGAAGTTCTGGATGGACGTAATAACCTGGGTG 156615 || | |||| |||| || | || || | | | ||||| || || ||||| || | Sbjct 53136 TTGGCGTGT---ATGAGGAAGAGGGCAAGCAGATCCACGATGGTCGCAACAACCTCGGGG 53080 Query 156616 TGGTGACAATCAACCTCCCGCGTATTGCTCTTGAAGCACAATCGCAGGAAGATGAAGACG 156675 | | | ||||||| ||||| || || || ||||| || | || | ||||| | Sbjct 53079 TAATCAGCCTCAACCTGCCGCGCATCGCGCTGGAAGCGGAA-CACA-----ACGAAGA-G 53027 Query 156676 CACATGACGCATTCTGGCGTATCCTTGATGAACGTCTGGAACTGTGCTTTGAAGCCCTGA 156735 | |||||| | || ||| | |||||| ||||| |||| ||| Sbjct 53026 C--------GTTTCTGGAACCTGCTGGATAATCGTCTGCAACTGGCGAAAAAAGCGTTGA 52975 Query 156736 TGACTCGCATCGATAGCCTACGCGGTGTTAAAGCCAGTGTAGCCCCGATCCTGTACACGG 156795 |||| ||||||| | | || |||||| |||| || ||||||||||| | || Sbjct 52974 TGACGCGCATCGCGCGTTTGGAAAACGTCAAAGCCCGTGTCGCTCCGATCCTGTATATGG 52915 Query 156796 AAGGTGCATTCGGTGTTCGTCTGAA 156820 ||||||| | |||||| || ||||| Sbjct 52914 AAGGTGCCTGCGGTGTACGCCTGAA 52890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577461879803200