Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_007045.1 Length=15603 Score E Sequences producing significant alignments: (Bits) Value seq89 107 2e-19 >seq89 Length=3091062 Score = 107 bits (118), Expect = 2e-19 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 4350 TATATAAAAGAAGAACAATAATAGATATTTTATCTGAAAACCCCGTAGGCATATAACTGC 4409 ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||| || | Sbjct 120931 TATGTTAAAGAAGAACAATAATAGATATTGTATCTGAAAACCCCGTAGGCATATACCTAC 120872 Query 4410 GGGGTTATTTTT 4421 |||||||||||| Sbjct 120871 GGGGTTATTTTT 120860 Score = 84.2 bits (92), Expect = 2e-12 Identities = 74/92 (80%), Gaps = 4/92 (4%) Strand=Plus/Minus Query 5414 TTTTATTTAACTGCTTATATTTTCTAGTTTATTCATCATATCTTTAGCCATCTGATCAGT 5473 ||||| ||| || ||| | ||||||||||||||||||| |||| ||||||| ||||| Sbjct 76984 TTTTAGTTACCTACTT----TCTCTAGTTTATTCATCATATTTTTATCCATCTGTTCAGT 76929 Query 5474 AACATGGGTGTATATCTCTAAAGTTGTTTTAT 5505 |||||| | ||||| | ||| ||||| |||| Sbjct 76928 GACATGGCTATATATATGTAATGTTGTCTTAT 76897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49810392529316