Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_007052.1 Length=45861 Score E Sequences producing significant alignments: (Bits) Value seq89 922 0.0 >seq89 Length=3091062 Score = 922 bits (1022), Expect = 0.0 Identities = 820/1018 (81%), Gaps = 6/1018 (1%) Strand=Plus/Plus Query 25881 TATTAATCTCTATCACCGTTGAAAATAGAGTTTCTAACAATAACATAATCTACAGTACGT 25940 ||||| ||||||||||| || ||||| |||||||| ||||| |||||||| || | | | Sbjct 2153277 TATTAGTCTCTATCACCATTAAAAATTGAGTTTCTTACAATTACATAATCCACTTTTCTT 2153336 Query 25941 AATGATTTCAAGTCTTTTCCACCGGCATATGAAATTGAGCTTTGTAAATCTTGTTGCATT 26000 |||||||| | ||| | ||||| |||||||||||||| ||||| ||||||||||||||| Sbjct 2153337 AATGATTTAAGGTCAGTGCCACCCGCATATGAAATTGAACTTTGCAAATCTTGTTGCATT 2153396 Query 26001 TCTTTTAAGGTATCCATTAATGACCCCTTATGTTCTACAAACAtttttttACCTTCTACA 26060 || | || |||| |||||| || || ||||| ||||||||||| |||||||||||| Sbjct 2153397 TCAATCAATGTATTAGATAATGATCCTTTGTGTTCAACAAACATTTTCTTACCTTCTACA 2153456 Query 26061 TTTTTATGTTCGCCTTTTTGAAATTCAGATGCACTACCAAAATATTCTTTATACTGTTTA 26120 ||||||||||| |||||||| |||||||| || ||||| |||||||||||||| |||| Sbjct 2153457 TTTTTATGTTCACCTTTTTGGAATTCAGAGGCGCTACCGAAATATTCTTTATATAGTTTG 2153516 Query 26121 CCATCAAGTTCTACAGTTTCACCAGGTGATTCTTCGTGTGCCGCAAATAATGAACCAATC 26180 ||||| | ||| || |||||||||||||| ||||| || || ||||||||||| |||| | Sbjct 2153517 CCATCTAATTCCACTGTTTCACCAGGTGACTCTTCATGCGCAGCAAATAATGATCCAACC 2153576 Query 26181 ATGACCATTGATGCACCAAATCTAATTGACTTAGCGATGTCGCCATGCGTTCTTATGCCA 26240 || ||||| ||||||||||| | || || ||||| || || ||||||||||| || ||| Sbjct 2153577 ATAACCATAGATGCACCAAAGCGTATAGATTTAGCAATATCACCATGCGTTCTAATACCA 2153636 Query 26241 CCATCGGCAATCAAAGGTTTACGAGCTGCTTTACTACATATGTTTAATGCCGCTAACTGC 26300 ||||| ||||| | ||||| | || ||||||||||| |||||||| | ||| ||| Sbjct 2153637 CCATCAGCAATAATTGGTTTTCTTGCCGCTTTACTACAGTGATTTAATGCTGATAATTGC 2153696 Query 26301 CAACCACCAGTACCAAAACCTGTTTTAATCTTTGTAATACAAACTCTACCAGGACCTATA 26360 ||||| || |||||||| |||||||||||||| || ||||||||||| || || || ||| Sbjct 2153697 CAACCGCCTGTACCAAATCCTGTTTTAATCTTAGTTATACAAACTCTTCCTGGTCCGATA 2153756 Query 26361 CCGACTTTGGTAGCATCAGCACCAGCATTTTCTAATTCTCTAACACCTTCTGGCGTACCA 26420 || |||||||||||||| || ||||| ||||||||||| | || || ||||| |||||| Sbjct 2153757 CCAACTTTGGTAGCATCTGCGCCAGCGTTTTCTAATTCGCGTACGCCCTCTGGAGTACCA 2153816 Query 26421 ACATTACCAGCAATAACAAA-ACTATCAGGTATATGGGTTTTAATATGTTTAATCATGTT 26479 |||||||| || || ||||| ||| ||||| ||||| |||||||||||||||||| || Sbjct 2153817 ACATTACCTGCGATTACAAATACT-TCAGGAATATGTTGTTTAATATGTTTAATCATATT 2153875 Query 26480 TATCACTGAATCTGAGTGACCATGCGCAATATCTATTGTAATATATTCGGGGATTAATTT 26539 || || |||||||| |||||||| || ||||| ||||||||||| || || |||| ||| Sbjct 2153876 GATTACAGAATCTGAATGACCATGTGCGATATCAATTGTAATATAATCTGGAATTATTTT 2153935 Query 26540 TTCTTGAGCTAACTTTTCAATAAAATCAAATTCCGCTTTCTTT-ACACCAACTGAAATAG 26598 ||| | |||||| | || | ||||||||||| | | |||||| ||||| || ||||| | Sbjct 2153936 TTCATTAGCTAATTGCTCTACAAAATCAAATT-CACGTTCTTTAACACCTACAGAAATTG 2153994 Query 26599 ATGCAAATAAGCCTGAATTTTGCATATGTTTTATAAAAGGTATTCTTGCTTCTTCATCAA 26658 |||||| || ||| | ||||| ||| |||| || || | ||| ||||||||| Sbjct 2153995 ATGCAATCAAACCTTTTTCATGCATTCTCTTTGTAAATGGGATACGTGCCGCTTCATCAA 2154054 Query 26659 AACGATGCATGATATAAAAGTAATCATTTTCAGCAAACCATTTCGCTAATTTCTCATTCA 26718 | | ||||| |||||||| |||||||||||||||||||||| ||||||| ||||||| Sbjct 2154055 ATCTGTGCATAATATAAAAATAATCATTTTCAGCAAACCATTCAGCTAATTCTTCATTCA 2154114 Query 26719 TAACTGTTTGCATATTTGCAGGAACTACAGGTAGCTTGAATTTTTTCGGACCAAATTGGA 26778 | ||||||||||||||||| ||||| || |||| || || |||| ||||||||||| | Sbjct 2154115 TTACTGTTTGCATATTTGCTGGAACGACTGGTAATTTAAAACTTTTTGGACCAAATTGAA 2154174 Query 26779 TAGTTGTATCACATTCTGATCTACTCTCAACTATACATTTATTAGGTATTAATTGAATAT 26838 || || |||||||| || | ||| | || ||||||||||| ||||||| ||| |||| Sbjct 2154175 CTGTCGTGTCACATTCAGAACGACTATTTACAATACATTTATTCGGTATTAGTTGGATAT 2154234 Query 26839 CTTCATAGTCAAATATTTTCATTTTTATTTACCGCCTATATATTTTT-ATGAAACCTT 26895 ||||||| ||||| || |||||| ||| | | |||| | |||||| || |||| || Sbjct 2154235 CTTCATAATCAAAAATCTTCATTGTTAACAAACCCCTA-ACATTTTTAATAAAACATT 2154291 Score = 244 bits (270), Expect = 3e-60 Identities = 245/318 (77%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 34886 AATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAGC 34945 |||| |||| ||| || ||||| || || ||||| ||||||||||||||||||||| | Sbjct 140632 AATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAAC 140573 Query 34946 GCCAAATGGTGTGAGTGTTACCACTTTCACTATCGCAGTTAACAGAACATTTACTAACGC 35005 || || ||||||||| | ||||| ||| | ||||| ||| | || ||||| || || Sbjct 140572 ACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGC 140513 Query 35006 TCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTTTTAGAAAACAAGCAGAAAA 35065 ||||| ||||| || ||||| || ||||| ||||| |||||||||||||||||| || Sbjct 140512 GCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAA 140453 Query 35066 TGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACG 35125 ||||||||| || || | |||||| || || |||||||| || || | |||||||| Sbjct 140452 TGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACG 140393 Query 35126 CAGTTATGAAAACAAAGACGGGCAACGTGTGTTTGTTACAGAAGTAGTAGCGGACAGTGT 35185 || ||||||||| |||| || | ||||| ||||| || |||||||| || || || Sbjct 140392 TAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGT 140333 Query 35186 TCAATTCTTAGAACCGAA 35203 ||||||| | ||||| || Sbjct 140332 TCAATTCCTTGAACCTAA 140315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146631158733852