Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_007054.1 Length=44777 Score E Sequences producing significant alignments: (Bits) Value seq89 96.9 1e-15 >seq89 Length=3091062 Score = 96.9 bits (106), Expect = 1e-15 Identities = 125/169 (74%), Gaps = 8/169 (5%) Strand=Plus/Minus Query 23770 AAGCGTTTTATAAAGCTTGTAAAAAATA---TAAGGGCaaaaaaaGGGCAGATTTAAGCT 23826 ||| |||||||| | |||| ||||| ||||| || ||||||||||||| | | Sbjct 2303995 AAGGGTTTTATA--GGTTGTTCAAAATTAACTAAGGTCAGAAAAAGGGCAGATAGAT--T 2303940 Query 23827 AACTTGGAATGTTTTCGAGTTTTTGAGTTAGTTCTCTATCCATTTTTTCAGTTACATGAG 23886 |||||||||| ||||| | ||| | |||| | | | |||| |||||| |||| ||| | Sbjct 2303939 AACTTGGAATATTTTCAAATTTCTAGGTTAACTGTTTGTCCA-TTTTTCTGTTAAATGCG 2303881 Query 23887 TATATATGCGAATGGTTGTTTTTTCATCTACATGTCCTACCCTTTTCAT 23935 | ||||| |||| || |||||||| || ||| || || |||||||| Sbjct 2303880 TGTATATTTGAATAGTAGTTTTTTCGTCAGTATGACCAACTCTTTTCAT 2303832 Score = 91.5 bits (100), Expect = 4e-14 Identities = 157/220 (71%), Gaps = 11/220 (5%) Strand=Plus/Minus Query 24893 TTCTTTTTGTGATTGTTTTGTATTCTTGTTCAACACAACACTTACGC-GCTTCCATTTAT 24951 |||||| || || ||| |||| ||||||| ||||||| ||| | || || |||||| Sbjct 2303273 TTCTTTCTGAGAAATTTTAGTATCTTTGTTCATTACAACACATACTCTGCGTC-ATTTAT 2303215 Query 24952 CTGTGTATGGATCTTTATACTTCTCGTAGTATCTGTATTTAGTTTCGTTAtttttgtttt 25011 | |||||| ||||||||||||| || | | ||||||||||| | ||| | || Sbjct 2303214 CCGTGTATAAGTCTTTATACTTCTTATATAAGCGGTATTTAGTTTTGCCTGCTTTATCTT 2303155 Query 25012 taaatttttCAATCCACAT-GTTTATACCTCCTGA----GAGAACGTACGTTC--TGTAA 25064 |||||| ||| |||||| | ||| |||||| | |||||||| |||| | ||| Sbjct 2303154 TAAATTGTTCTGACCACATAATGTATTCCTCCTTACATTTAGAACGTAAGTTCAATATAA 2303095 Query 25065 ATTTGTAAAAAATAATAAGGGTAGGTGG-GCTACCCAAAA 25103 | | || ||||||| |||| || || || ||||||| Sbjct 2303094 AGAT-TAGAAAATAAATAGGGCAGTAGGAACTGCCCAAAA 2303056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143162416485036