Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_007062.1 Length=41690 Score E Sequences producing significant alignments: (Bits) Value seq89 95.1 3e-15 >seq89 Length=3091062 Score = 95.1 bits (104), Expect = 3e-15 Identities = 167/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 28707 ATGTTATTATCGTTCAGTATAAAATCGCGTATCTGTATTACCTGTTCCATCTCTAAATAG 28766 ||||| || | ||| | |||||| || ||||| | || || || ||| || | |||| Sbjct 2303710 ATGTTTTT-TAGTTAA-TATAAATTCACGTATTTTTAACACTTGAATCATTTCAAGATAG 2303653 Query 28767 TTATACATTTTCGCTTCTTCTTTTTCTATATCTTCTATCGTCTTACTCTTCTTTGGTAGT 28826 ||||| ||||| |||||||||||| |||||||||| || ||| ||||| ||| | Sbjct 2303652 TTATATATTTTT--TTCTTCTTTTTCAATATCTTCTAGAGTTTTAGCTTTCTTAAGTACT 2303595 Query 28827 GTGACGCTATTTAATATGTGTTCGTTTGGATAATTGTAAAATTTAACGGCGTATTTAATA 28886 || |||||| || || | || | || | |||||||| || ||| | | Sbjct 2303594 TCTACATCATTTAACATATGCTTATTAGTGTATCTATAAAATTTCGTTGCATATGCTAAA 2303535 Query 28887 GCTTCTTTCATATGTCCAAGTTGACGCTTTACCTGATTTTCAGAATATATGTTTGATAAT 28946 |||| |||||||| |||||| || | || || ||||| ||||| || || |||||| Sbjct 2303534 GCTTTTTTCATATCATTAAGTTGTCGTATAACTTGGTTTTCTGAATAAATTTTAGATAAT 2303475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133284180948048